RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 SLC25A12O75746 678 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 CD52P31358 61 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 SULT2A1Q06520 285 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 TRIM32Q13049 653 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 ADGRE1Q14246 886 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 GCNT6Q5T4J0 391 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 FAM46CQ5VWP2 391 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 CLEC6AQ6EIG7 209 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 C17orf64Q86WR6 236 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 MCCC1Q96RQ3 725 aaPredicted RBP13.03□□□□□ -0.32
TNC-212ENST00000542877 GPR20Q99678 358 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 DNAJB4Q9UDY4 337 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 POMPQ9Y244 141 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 GPSM3Q9Y4H4 160 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 E9PAM4 449 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 AMD1P17707 334 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 ARL2P36404 184 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 KLHL24Q6TFL4 600 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 OAFQ86UD1 273 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 UNC5BQ8IZJ1 945 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 ZNF248Q8NDW4 579 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 SUCOQ9UBS9 1254 aaKnown RBP13.03□□□□□ -0.32
TNC-212ENST00000542877 SEC14L3Q9UDX4 400 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 DGKBQ9Y6T7 804 aa13.03□□□□□ -0.32
TNC-212ENST00000542877 FAM149AA5PLN7 773 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 ISM1B1AKI9 464 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 TEX28O15482 410 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 ZNF12P17014 697 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 CHRNB2P17787 502 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 L1CAMP32004 1257 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 BRCC3P46736 316 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 SLC4A9Q96Q91 983 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 TTLL2Q9BWV7 592 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 CNTN6Q9UQ52 1028 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 SLC27A6Q9Y2P4 619 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 PEX16Q9Y5Y5 336 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 CLDN25C9JDP6 229 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 MATN2O00339 956 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 SCAMP3O14828 347 aaKnown RBP13.02□□□□□ -0.32
TNC-212ENST00000542877 MATN3O15232 486 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 ASLP04424 464 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 CD48P09326 243 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 ELFN1P0C7U0 828 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 MAP2K5Q13163 448 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 PTGES3Q15185 160 aaKnown RBP13.02□□□□□ -0.32
TNC-212ENST00000542877 MEIOBQ8N635 442 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 KLHL23Q8NBE8 558 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 FAXDC2Q96IV6 333 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 NUSAP1Q9BXS6 441 aaKnown RBP13.02□□□□□ -0.32
TNC-212ENST00000542877 MIOSQ9NXC5 875 aa13.02□□□□□ -0.32
TNC-212ENST00000542877 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.02□□□□□ -0.33
TNC-212ENST00000542877 ADAMDEC1O15204 470 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 MSI1O43347 362 aaKnown RBP13.02□□□□□ -0.33
TNC-212ENST00000542877 CCNDBP1O95273 360 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 ITPKAP23677 461 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 AQP4P55087 323 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 GPR142Q7Z601 462 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 C1orf127Q8N9H9 656 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 FAM98AQ8NCA5 519 aaKnown RBP13.02□□□□□ -0.33
TNC-212ENST00000542877 DNAJC1Q96KC8 554 aaKnown RBP13.02□□□□□ -0.33
TNC-212ENST00000542877 FERD3LQ96RJ6 166 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 AIF1LQ9BQI0 150 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 CORO1BQ9BR76 489 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 GPN1Q9HCN4 374 aaPredicted RBP13.02□□□□□ -0.33
TNC-212ENST00000542877 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.02□□□□□ -0.33
TNC-212ENST00000542877 PDE10AQ9Y233 779 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 PCDHGB3Q9Y5G1 929 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 RAI2Q9Y5P3 530 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 C9P02748 559 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 SSR2P43308 183 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 MYBPC1Q00872 1141 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 IL18Q14116 193 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 TNFAIP8L3Q5GJ75 292 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 RALGPS1Q5JS13 557 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 BEND5Q7L4P6 421 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 RAD51AP1Q96B01 352 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 DMAC2Q9NW81 257 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 TAS2R1Q9NYW7 299 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 STXBP5LQ9Y2K9 1186 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 C2CD4BA6NLJ0 364 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 STX16-NPEPL1H3BU86 382 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 GTPBP1O00178 669 aaKnown RBP13.02□□□□□ -0.33
TNC-212ENST00000542877 STX16O14662 325 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 PSIP1O75475 530 aaKnown RBP13.02□□□□□ -0.33
TNC-212ENST00000542877 AQP1P29972 269 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 RPS6KA3P51812 740 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 ACTR3P61158 418 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 MBTD1Q05BQ5 628 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 C10orf82Q8WW14 230 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 TBATAQ96M53 351 aa13.02□□□□□ -0.33
TNC-212ENST00000542877 A0A1W2PQ67 120 aa13.01□□□□□ -0.33
TNC-212ENST00000542877 MTRF1O75570 445 aaKnown RBP13.01□□□□□ -0.33
TNC-212ENST00000542877 IL1BP01584 269 aa13.01□□□□□ -0.33
TNC-212ENST00000542877 IFNW1P05000 195 aa13.01□□□□□ -0.33
TNC-212ENST00000542877 CYP3A5P20815 502 aa13.01□□□□□ -0.33
TNC-212ENST00000542877 SPAM1P38567 509 aa13.01□□□□□ -0.33
TNC-212ENST00000542877 CCNHP51946 323 aaPredicted RBP13.01□□□□□ -0.33
TNC-212ENST00000542877 SCN1BQ07699 218 aa13.01□□□□□ -0.33
TNC-212ENST00000542877 POM121L1PQ3SYA9 428 aa13.01□□□□□ -0.33
TNC-212ENST00000542877 PRAMEF19Q5SWL8 479 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms