RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 ATOH1Q92858 354 aaPredicted RBP22.87■■□□□ 1.25
HOMER3-205ENST00000542541 CCDC77Q9BR77 488 aa22.87■■□□□ 1.25
HOMER3-205ENST00000542541 VPS18Q9P253 973 aa22.87■■□□□ 1.25
HOMER3-205ENST00000542541 TXNDC16Q9P2K2 825 aa22.87■■□□□ 1.25
HOMER3-205ENST00000542541 DOCK9Q9BZ29 2069 aa22.87■■□□□ 1.25
HOMER3-205ENST00000542541 GPR89AB7ZAQ6 455 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 TLR4O00206 839 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 VILLO15195 856 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 GPR89BP0CG08 455 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 CA5AP35218 305 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 NSG1P42857 185 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 C21orf59P57076 290 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 TMEM115Q12893 351 aaPredicted RBP22.86■■□□□ 1.25
HOMER3-205ENST00000542541 ILF2Q12905 390 aaKnown RBP22.86■■□□□ 1.25
HOMER3-205ENST00000542541 PDE1CQ14123 709 aaPredicted RBP22.86■■□□□ 1.25
HOMER3-205ENST00000542541 KLHL38Q2WGJ6 581 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 KDM7AQ6ZMT4 941 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 MICALCLQ6ZW33 695 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 GALNT7Q86SF2 657 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 LDB1Q86U70 411 aaPredicted RBP22.86■■□□□ 1.25
HOMER3-205ENST00000542541 LRRC6Q86X45 466 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 WDR92Q96MX6 357 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 PCDHGA5Q9Y5G8 931 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 CACNA1HO95180 2353 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 USP34Q70CQ2 3546 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 MUC6Q6W4X9 2439 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 ZNF106Q9H2Y7 1883 aaKnown RBP22.86■■□□□ 1.25
HOMER3-205ENST00000542541 IGLV3-16A0A075B6K0 115 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 CDK14O94921 469 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 S1PR4O95977 384 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 HSD17B3P37058 310 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 GTF2H3Q13889 308 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 LPAL2Q16609 132 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 PACS1Q6VY07 963 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 TRIM74Q86UV6 250 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 ARFGAP3Q9NP61 516 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 GPR27Q9NS67 375 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 TMEM74BQ9NUR3 256 aa22.86■■□□□ 1.25
HOMER3-205ENST00000542541 ATXN2Q99700 1313 aaKnown RBP22.85■■□□□ 1.25
HOMER3-205ENST00000542541 GON4LQ3T8J9 2241 aa22.85■■□□□ 1.25
HOMER3-205ENST00000542541 CEP192Q8TEP8 1941 aa22.85■■□□□ 1.25
HOMER3-205ENST00000542541 UQCRHLA0A096LP55 91 aa22.85■■□□□ 1.25
HOMER3-205ENST00000542541 SPTY2D1-AS1A0A0U1RR47 76 aa22.85■■□□□ 1.25
HOMER3-205ENST00000542541 F8W8V4 182 aa22.85■■□□□ 1.25
HOMER3-205ENST00000542541 TNFRSF10CO14798 259 aa22.85■■□□□ 1.25
HOMER3-205ENST00000542541 UQCRHP07919 91 aa22.85■■□□□ 1.25
HOMER3-205ENST00000542541 LEPRP48357 1165 aaKnown RBP22.85■■□□□ 1.25
HOMER3-205ENST00000542541 CSNK1EP49674 416 aaKnown RBP22.85■■□□□ 1.25
HOMER3-205ENST00000542541 DUOXA1Q1HG43 343 aa22.85■■□□□ 1.25
HOMER3-205ENST00000542541 UBAP2Q5T6F2 1119 aaKnown RBP22.85■■□□□ 1.25
HOMER3-205ENST00000542541 LAIR1Q6GTX8 287 aa22.85■■□□□ 1.25
HOMER3-205ENST00000542541 MACC1Q6ZN28 852 aa22.85■■□□□ 1.25
HOMER3-205ENST00000542541 PPM1NQ8N819 430 aa22.85■■□□□ 1.25
HOMER3-205ENST00000542541 OR56A4Q8NGH8 313 aa22.85■■□□□ 1.25
HOMER3-205ENST00000542541 UHMK1Q8TAS1 419 aaKnown RBP22.85■■□□□ 1.25
HOMER3-205ENST00000542541 CLPBQ9H078 707 aa22.85■■□□□ 1.25
HOMER3-205ENST00000542541 OR2AG1Q9H205 316 aa22.85■■□□□ 1.25
HOMER3-205ENST00000542541 EPB41L4BQ9H329 900 aa22.85■■□□□ 1.25
HOMER3-205ENST00000542541 RMI1Q9H9A7 625 aa22.85■■□□□ 1.25
HOMER3-205ENST00000542541 SMG5Q9UPR3 1016 aaKnown RBP22.85■■□□□ 1.25
HOMER3-205ENST00000542541 SLC17A4Q9Y2C5 497 aa22.85■■□□□ 1.25
HOMER3-205ENST00000542541 TMEM98Q9Y2Y6 226 aa22.85■■□□□ 1.25
HOMER3-205ENST00000542541 OAS3Q9Y6K5 1087 aaKnown RBP22.85■■□□□ 1.25
HOMER3-205ENST00000542541 DMDP11532 3685 aa22.85■■□□□ 1.25
HOMER3-205ENST00000542541 PRMT5O14744 637 aaPredicted RBP22.84■■□□□ 1.25
HOMER3-205ENST00000542541 MTX2O75431 263 aa22.84■■□□□ 1.25
HOMER3-205ENST00000542541 C1QAP02745 245 aa22.84■■□□□ 1.25
HOMER3-205ENST00000542541 WNT1P04628 370 aa22.84■■□□□ 1.25
HOMER3-205ENST00000542541 ATP1B2P14415 290 aaPredicted RBP22.84■■□□□ 1.25
HOMER3-205ENST00000542541 DOK6Q6PKX4 331 aa22.84■■□□□ 1.25
HOMER3-205ENST00000542541 ENPP7Q6UWV6 458 aa22.84■■□□□ 1.25
HOMER3-205ENST00000542541 MARK2Q7KZI7 788 aaKnown RBP22.84■■□□□ 1.25
HOMER3-205ENST00000542541 ADGRG6Q86SQ4 1221 aa22.84■■□□□ 1.25
HOMER3-205ENST00000542541 ZNF514Q96K75 400 aaPredicted RBP22.84■■□□□ 1.25
HOMER3-205ENST00000542541 CPNE1Q99829 537 aa22.84■■□□□ 1.25
HOMER3-205ENST00000542541 SMYD2Q9NRG4 433 aa22.84■■□□□ 1.25
HOMER3-205ENST00000542541 ATXN10Q9UBB4 475 aa22.84■■□□□ 1.25
HOMER3-205ENST00000542541 IKBKGQ9Y6K9 419 aa22.84■■□□□ 1.25
HOMER3-205ENST00000542541 MYO15AQ9UKN7 3530 aa22.84■■□□□ 1.25
HOMER3-205ENST00000542541 TMEM202A6NGA9 273 aa22.83■■□□□ 1.25
HOMER3-205ENST00000542541 QSOX1O00391 747 aa22.83■■□□□ 1.25
HOMER3-205ENST00000542541 AP2A2O94973 939 aa22.83■■□□□ 1.25
HOMER3-205ENST00000542541 EPN2O95208 641 aa22.83■■□□□ 1.25
HOMER3-205ENST00000542541 ADARP55265 1226 aaKnown RBP22.83■■□□□ 1.25
HOMER3-205ENST00000542541 UAP1Q16222 522 aaPredicted RBP22.83■■□□□ 1.25
HOMER3-205ENST00000542541 ZNF648Q5T619 568 aaPredicted RBP22.83■■□□□ 1.25
HOMER3-205ENST00000542541 STRA8Q7Z7C7 330 aa22.83■■□□□ 1.25
HOMER3-205ENST00000542541 SLC22A18ASQ8N1D0 253 aa22.83■■□□□ 1.25
HOMER3-205ENST00000542541 PNPLA1Q8N8W4 532 aa22.83■■□□□ 1.25
HOMER3-205ENST00000542541 FBXO6Q9NRD1 293 aaPredicted RBP22.83■■□□□ 1.25
HOMER3-205ENST00000542541 SPAG17Q6Q759 2223 aa22.83■■□□□ 1.25
HOMER3-205ENST00000542541 EXOC1LA0A1B0GW35 172 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 UBA6A0AVT1 1052 aaPredicted RBP22.82■■□□□ 1.24
HOMER3-205ENST00000542541 CXorf49A8MYA2 514 aaPredicted RBP22.82■■□□□ 1.24
HOMER3-205ENST00000542541 AHSGP02765 367 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 CEACAM5P06731 702 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 RPS3P23396 243 aaKnown RBP eCLIP22.82■■□□□ 1.24
HOMER3-205ENST00000542541 MPP1Q00013 466 aa22.82■■□□□ 1.24
HOMER3-205ENST00000542541 KHDC1Q4VXA5 237 aaKnown RBP22.82■■□□□ 1.24
HOMER3-205ENST00000542541 BEND6Q5SZJ8 279 aaPredicted RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms