RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 ZNF606Q8WXB4 792 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 NACC2Q96BF6 587 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 TBC1D31Q96DN5 1066 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 EXOC2Q96KP1 924 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 SYTL2Q9HCH5 934 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 POT1Q9NUX5 634 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 SEMA5BQ9P283 1151 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 SEC14L3Q9UDX4 400 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 GPN3Q9UHW5 284 aaPredicted RBP9.3□□□□□ -0.92
YBX3-211ENST00000541351 PCDHGC4Q9Y5F7 938 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 SNX10Q9Y5X0 201 aa9.3□□□□□ -0.92
YBX3-211ENST00000541351 MDC1Q14676 2089 aaKnown RBP9.3□□□□□ -0.92
YBX3-211ENST00000541351 UBA6A0AVT1 1052 aaPredicted RBP9.29□□□□□ -0.92
YBX3-211ENST00000541351 C19orf84I3L1E1 186 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 K7ELQ4 463 aaPredicted RBP9.29□□□□□ -0.92
YBX3-211ENST00000541351 FOLR1P15328 257 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 VIPR1P32241 457 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 CA5AP35218 305 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 FOLR3P41439 243 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 UBE2IP63279 158 aaKnown RBP9.29□□□□□ -0.92
YBX3-211ENST00000541351 PPP2R2BQ00005 443 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 DENND2CQ68D51 928 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 OLFML1Q6UWY5 402 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 FAM183BPQ6ZVS7 135 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 CAMKMTQ7Z624 323 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 NLRP14Q86W24 1093 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 SYTL1Q8IYJ3 562 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 NDUFAF2Q8N183 169 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 CARFQ8N187 725 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 ACBD4Q8NC06 268 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 SHC3Q92529 594 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 NT5C3BQ969T7 300 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 ECHDC3Q96DC8 303 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 MAGED4Q96JG8 741 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 FAM81BQ96LP2 452 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 TREX2Q9BQ50 279 aaPredicted RBP9.29□□□□□ -0.92
YBX3-211ENST00000541351 ANLNQ9NQW6 1124 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 CCM2LQ9NUG4 571 aaPredicted RBP9.29□□□□□ -0.92
YBX3-211ENST00000541351 P4HTMQ9NXG6 502 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 COQ3Q9NZJ6 369 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 OGFRQ9NZT2 677 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 LHX3Q9UBR4 397 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 B4GALT6Q9UBX8 382 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 SH3BGRL2Q9UJC5 107 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 TMEM98Q9Y2Y6 226 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 DOCK4Q8N1I0 1966 aa9.29□□□□□ -0.92
YBX3-211ENST00000541351 PIKFYVEQ9Y2I7 2098 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.28□□□□□ -0.92
YBX3-211ENST00000541351 TLCD2A6NGC4 264 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 SLC9B1P1A6NJY1 282 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 PMM2O15305 246 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 P4HA2O15460 535 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 LDB2O43679 373 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 KIF1CO43896 1103 aaKnown RBP9.28□□□□□ -0.92
YBX3-211ENST00000541351 KLRC4O43908 158 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 MTA2O94776 668 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 HEXIM1O94992 359 aaKnown RBP9.28□□□□□ -0.92
YBX3-211ENST00000541351 INHBBP09529 407 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 EBLN1P0CF75 366 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 ATXN8OSP0DMR3 200 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 ACP5P13686 325 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 SCNN1AP37088 669 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 ETV3P41162 512 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 CLCNKAP51800 687 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 TDGF1P3P51864 188 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 AP1S1P61966 158 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 CEBPEQ15744 281 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 CNGA3Q16281 694 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 PLEKHS1Q5SXH7 462 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 ZNF324BQ6AW86 544 aaPredicted RBP9.28□□□□□ -0.92
YBX3-211ENST00000541351 Q71RC1 249 aaPredicted RBP9.28□□□□□ -0.92
YBX3-211ENST00000541351 SRLQ86TD4 932 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 NLRP8Q86W28 1048 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 PELI3Q8N2H9 469 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 D2HGDHQ8N465 521 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 EXD1Q8NHP7 514 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 SPOCK2Q92563 424 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 AP2M1Q96CW1 435 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 TMX3Q96JJ7 454 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 PLEKHG4BQ96PX9 1271 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 USP28Q96RU2 1077 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 CPXM1Q96SM3 734 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 TBCBQ99426 244 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 TSG101Q99816 390 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 ACTR5Q9H9F9 607 aaPredicted RBP9.28□□□□□ -0.92
YBX3-211ENST00000541351 KCNN3Q9UGI6 736 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 ARMCX3Q9UH62 379 aaPredicted RBP9.28□□□□□ -0.92
YBX3-211ENST00000541351 KCNK6Q9Y257 313 aa9.28□□□□□ -0.92
YBX3-211ENST00000541351 NSD1Q96L73 2696 aaPredicted RBP9.28□□□□□ -0.92
YBX3-211ENST00000541351 TRAV17A0A0B4J275 112 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 DYTNA2CJ06 578 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 A8MX80 341 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 SLC19A2O60779 497 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 GADD45BO75293 160 aaPredicted RBP9.27□□□□□ -0.93
YBX3-211ENST00000541351 ZBTB11O95625 1053 aaPredicted RBP9.27□□□□□ -0.93
YBX3-211ENST00000541351 EML2O95834 649 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 GM2AP17900 193 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 CYP2A7P20853 494 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 ADORA2A-AS1P86434 159 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 DNTTIP2Q5QJE6 756 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms