RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 TPRP12270 2363 aaKnown RBP16.69■□□□□ 0.26
CD9-209ENST00000540891 A6NCN8 305 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 PRR19A6NJB7 356 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 ERI2A8K979 691 aaKnown RBP16.68■□□□□ 0.26
CD9-209ENST00000540891 CCL22O00626 93 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 NUDT21O43809 227 aaKnown RBP16.68■□□□□ 0.26
CD9-209ENST00000540891 VEGFDO43915 354 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 KIF5CO60282 957 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 PRAMEF1O95521 474 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 TMPRSS15P98073 1019 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 TMEM115Q12893 351 aaPredicted RBP16.68■□□□□ 0.26
CD9-209ENST00000540891 ITGA9Q13797 1035 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 GPRC6AQ5T6X5 926 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 TTC27Q6P3X3 843 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 CRTC3Q6UUV7 619 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 C11orf96Q7Z7L8 435 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 ARL14Q8N4G2 192 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 CCDC89Q8N998 374 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 KDF1Q8NAX2 398 aaPredicted RBP16.68■□□□□ 0.26
CD9-209ENST00000540891 DDHD1Q8NEL9 900 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 LRRC45Q96CN5 670 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 OSBPL9Q96SU4 736 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 C19orf43Q9BQ61 176 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 LRIT1Q9P2V4 623 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 TBC1D29Q9UFV1 150 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 SLC23A2Q9UGH3 650 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 PCDHB1Q9Y5F3 818 aa16.68■□□□□ 0.26
CD9-209ENST00000540891 AGAP14A8MT82 685 aa16.67■□□□□ 0.26
CD9-209ENST00000540891 SRP72O76094 671 aaKnown RBP16.67■□□□□ 0.26
CD9-209ENST00000540891 CDK14O94921 469 aa16.67■□□□□ 0.26
CD9-209ENST00000540891 PNLIPP16233 465 aa16.67■□□□□ 0.26
CD9-209ENST00000540891 ACTN2P35609 894 aa16.67■□□□□ 0.26
CD9-209ENST00000540891 CLCNKAP51800 687 aa16.67■□□□□ 0.26
CD9-209ENST00000540891 PDX1P52945 283 aa16.67■□□□□ 0.26
CD9-209ENST00000540891 CCL7P80098 99 aa16.67■□□□□ 0.26
CD9-209ENST00000540891 POU6F1Q14863 301 aa16.67■□□□□ 0.26
CD9-209ENST00000540891 PLA2G4EQ3MJ16 856 aa16.67■□□□□ 0.26
CD9-209ENST00000540891 ZNF438Q7Z4V0 828 aa16.67■□□□□ 0.26
CD9-209ENST00000540891 LINC00523Q86TU6 105 aa16.67■□□□□ 0.26
CD9-209ENST00000540891 LRRTM4Q86VH4 590 aa16.67■□□□□ 0.26
CD9-209ENST00000540891 RASGEF1AQ8N9B8 481 aa16.67■□□□□ 0.26
CD9-209ENST00000540891 ZNF398Q8TD17 642 aa16.67■□□□□ 0.26
CD9-209ENST00000540891 DNAJC1Q96KC8 554 aaKnown RBP16.67■□□□□ 0.26
CD9-209ENST00000540891 BPTFQ12830 3046 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 CSO75390 466 aaKnown RBP16.66■□□□□ 0.26
CD9-209ENST00000540891 TCEA3O75764 348 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 RPLP0P05388 317 aaKnown RBP16.66■□□□□ 0.26
CD9-209ENST00000540891 PSMA3P25788 255 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 CTSCP53634 463 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 B4GALNT1Q00973 533 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 PDE1BQ01064 536 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 CDH17Q12864 832 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 NFATC2Q13469 925 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 NR1D2Q14995 579 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 ISXQ2M1V0 245 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 LDLRAP1Q5SW96 308 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 SPRED1Q7Z699 444 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 CCNJLQ8IV13 435 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 SFRP1Q8N474 314 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 Q8N9G6 341 aaPredicted RBP16.66■□□□□ 0.26
CD9-209ENST00000540891 GDAP1Q8TB36 358 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 MDM1Q8TC05 714 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 SLC37A2Q8TED4 501 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 CCDC97Q96F63 343 aaPredicted RBP16.66■□□□□ 0.26
CD9-209ENST00000540891 DEPDC7Q96QD5 511 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 AP1M1Q9BXS5 423 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 LRRN3Q9H3W5 708 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 ASB8Q9H765 288 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 CASS4Q9NQ75 786 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 HOMER3Q9NSC5 361 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 KLC4Q9NSK0 619 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 NLE1Q9NVX2 485 aaPredicted RBP16.66■□□□□ 0.26
CD9-209ENST00000540891 SNX12Q9UMY4 172 aa16.66■□□□□ 0.26
CD9-209ENST00000540891 ZFC3H1O60293 1989 aaKnown RBP16.66■□□□□ 0.26
CD9-209ENST00000540891 TRBV23OR9-2A0A075B6M9 112 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 TMEM8BA6NDV4 472 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 MROH6A6NGR9 719 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 E7EVH7 732 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 H7C0S8 307 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 TAF4O00268 1085 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 KMOO15229 486 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 ZNF185O15231 689 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 PPM1DO15297 605 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 B4GAT1O43505 415 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 APRTP07741 180 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 ZNF7P17097 686 aaPredicted RBP16.65■□□□□ 0.26
CD9-209ENST00000540891 SEPT6Q14141 434 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 CYP1B1Q16678 543 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 RBM44Q6ZP01 1051 aaKnown RBP16.65■□□□□ 0.26
CD9-209ENST00000540891 GSTA5Q7RTV2 222 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 WDR48Q8TAF3 677 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 ACTRT1Q8TDG2 376 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 NAT14Q8WUY8 206 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 ZCCHC14Q8WYQ9 949 aaKnown RBP16.65■□□□□ 0.26
CD9-209ENST00000540891 TIMM29Q9BSF4 260 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 NRSN2Q9GZP1 204 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 SYNDIG1Q9H7V2 258 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 PRDM8Q9NQV8 689 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 ENTPD2Q9Y5L3 495 aa16.65■□□□□ 0.26
CD9-209ENST00000540891 KNTC1P50748 2209 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms