RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 PNPT1Q8TCS8 783 aaKnown RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 STYXQ8WUJ0 223 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 P2RY11Q96G91 374 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 ELMO2Q96JJ3 720 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 C1QTNF1Q9BXJ1 281 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 FTHL17Q9BXU8 183 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 YTHDF1Q9BYJ9 559 aaKnown RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 TM6SF2Q9BZW4 377 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 C8orf4Q9NR00 106 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 CCM2LQ9NUG4 571 aaPredicted RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 XPR1Q9UBH6 696 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 SPASTQ9UBP0 616 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 VANGL2Q9ULK5 521 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 NME7Q9Y5B8 376 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 ARID1BQ8NFD5 2236 aaPredicted RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 FAM149AA5PLN7 773 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 AQP12BA6NM10 295 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 ACKR2O00590 384 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 NRP2O60462 931 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 DLX3O60479 287 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 USP12O75317 370 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 FYNP06241 537 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 SBK3P0C264 359 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 USP17L7P0C7H9 530 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 C7P10643 843 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 CKBP12277 381 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 TPH1P17752 444 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 CTGFP29279 349 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 EEF1DP29692 281 aaKnown RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 ALDH4A1P30038 563 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 POLR2IP36954 125 aaKnown RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 WASP42768 502 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 BRCC3P46736 316 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 HLCSP50747 726 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 PIGFQ07326 219 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 ELAVL2Q12926 359 aaKnown RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 ZNF846Q147U1 533 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 PLCL1Q15111 1095 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 RBBP7Q16576 425 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 SMU1Q2TAY7 513 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 ZNF618Q5T7W0 954 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 EEF1DP3Q658K8 133 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 DOK6Q6PKX4 331 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 HACD2Q6Y1H2 254 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 C11orf74Q86VG3 221 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 AQP12AQ8IXF9 295 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 KIAA2013Q8IYS2 634 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 FSTL5Q8N475 847 aaPredicted RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 BEND7Q8N7W2 519 aaPredicted RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 ZNF614Q8N883 585 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 ACVR1CQ8NER5 493 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 PPHLN1Q8NEY8 458 aaKnown RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 ZUFSPQ96AP4 578 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 ZFP42Q96MM3 310 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 GPR22Q99680 433 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 HTATIP2Q9BUP3 242 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 TOR3AQ9H497 397 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 RAD21L1Q9H4I0 556 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 GOLGA2P5Q9HBQ8 144 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 TRIM39Q9HCM9 518 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 PLSCR3Q9NRY6 295 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 ST3GAL5Q9UNP4 418 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 TCAF1Q9Y4C2 921 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 PCDHB5Q9Y5E4 795 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 TRIP12Q14669 1992 aaPredicted RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 CACNA1EQ15878 2313 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 ZCWPW2A0A1B0GU75 182 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 FAM95CA0A1B0GW59 222 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 AURKAO14965 403 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 KPNA6O60684 536 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 RASAL1O95294 804 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 KRT75O95678 551 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 CPNE6O95741 557 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 NFICP08651 508 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 ALOX5P09917 674 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 GOT1P17174 413 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 ARNTP27540 789 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 OR1D2P34982 312 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 PBX3P40426 434 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 POLD2P49005 469 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 GLUD2P49448 558 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 ATXN1P54253 815 aaKnown RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 OCA2Q04671 838 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 OLIG2Q13516 323 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 FRG1Q14331 258 aaKnown RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 PUS10Q3MIT2 529 aaKnown RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 PLPP4Q5VZY2 271 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 TMEM135Q86UB9 458 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 GRAMD2AQ8IUY3 354 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 ZNF567Q8N184 647 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 TMEM199Q8N511 208 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 MINDY2Q8NBR6 621 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 OR13F1Q8NGS4 319 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 NPLOC4Q8TAT6 608 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 HMGCLL1Q8TB92 370 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 BRSK1Q8TDC3 778 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 RAB2BQ8WUD1 216 aa5.2□□□□□ -1.58
PROM1-220ENST00000540805 CENPNQ96H22 339 aaPredicted RBP5.2□□□□□ -1.58
PROM1-220ENST00000540805 SCLYQ96I15 445 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms