RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 TMEM246Q9BRR3 403 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 SLC39A3Q9BRY0 314 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 VPS28Q9UK41 221 aa8.64□□□□□ -1.03
DDB1-217ENST00000540166 COPG1Q9Y678 874 aaKnown RBP8.64□□□□□ -1.03
DDB1-217ENST00000540166 RIF1Q5UIP0 2472 aaKnown RBP8.64□□□□□ -1.03
DDB1-217ENST00000540166 TTC34A8MYJ7 566 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 LCP1P13796 627 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 EPCAMP16422 314 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 PGAM1P18669 254 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 CYP2F1P24903 491 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 GPD2P43304 727 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 IL5RAQ01344 420 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 NAB1Q13506 487 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 SLC12A1Q13621 1099 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 SQLEQ14534 574 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 SPANXN2Q5MJ10 180 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 ARMC4Q5T2S8 1044 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 OVOS1Q6IE37 1185 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 ZNF544Q6NX49 715 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 PRMT9Q6P2P2 845 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 ZPBP2Q6X784 338 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 TIFABQ6ZNK6 161 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 NEK10Q6ZWH5 1172 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 USP43Q70EL4 1123 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 RTN4RL1Q86UN2 441 aaPredicted RBP8.63□□□□□ -1.03
DDB1-217ENST00000540166 ZNF280BQ86YH2 543 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 SCUBE3Q8IX30 993 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 PGBD3Q8N328 593 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 LEMD2Q8NC56 503 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 MAPK15Q8TD08 544 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 ADAMTS16Q8TE57 1224 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 HDAC10Q969S8 669 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 DACT3Q96B18 629 aaPredicted RBP8.63□□□□□ -1.03
DDB1-217ENST00000540166 HPDLQ96IR7 371 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 ZNF717Q9BY31 904 aaPredicted RBP8.63□□□□□ -1.03
DDB1-217ENST00000540166 SOX17Q9H6I2 414 aaPredicted RBP8.63□□□□□ -1.03
DDB1-217ENST00000540166 CPNE5Q9HCH3 593 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 AASDHPPTQ9NRN7 309 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 ABI2Q9NYB9 513 aaPredicted RBP8.63□□□□□ -1.03
DDB1-217ENST00000540166 PNMA8BQ9ULN7 279 aaPredicted RBP8.63□□□□□ -1.03
DDB1-217ENST00000540166 MTF2Q9Y483 593 aaPredicted RBP8.63□□□□□ -1.03
DDB1-217ENST00000540166 PLXNA1Q9UIW2 1896 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 ICMTO60725 284 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 ABCB7O75027 752 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 NDUFS2O75306 463 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 RSL1D1O76021 490 aaKnown RBP8.63□□□□□ -1.03
DDB1-217ENST00000540166 MBL2P11226 248 aaPredicted RBP8.63□□□□□ -1.03
DDB1-217ENST00000540166 VDRP11473 427 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 ATP6V1B2P21281 511 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 TGM2P21980 687 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 ZNF143P52747 638 aaPredicted RBP8.63□□□□□ -1.03
DDB1-217ENST00000540166 SLC25A11Q02978 314 aaKnown RBP8.63□□□□□ -1.03
DDB1-217ENST00000540166 FRG1Q14331 258 aaKnown RBP8.63□□□□□ -1.03
DDB1-217ENST00000540166 FAM83EQ2M2I3 478 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 TYSND1Q2T9J0 566 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 REP15Q6BDI9 236 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 PRSS55Q6UWB4 352 aaPredicted RBP8.63□□□□□ -1.03
DDB1-217ENST00000540166 XYLT1Q86Y38 959 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 TICAM1Q8IUC6 712 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 ZDHHC13Q8IUH4 622 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 SPATA2LQ8IUW3 424 aaPredicted RBP8.63□□□□□ -1.03
DDB1-217ENST00000540166 UNC5BQ8IZJ1 945 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 SCML4Q8N228 414 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 PLD5Q8N7P1 536 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 ANKFN1Q8N957 763 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 NETO2Q8NC67 525 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 PGLYRP2Q96PD5 576 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 SORT1Q99523 831 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 PIF1Q9H611 641 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 CYP4F12Q9HCS2 524 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 WDR6Q9NNW5 1121 aaKnown RBP8.63□□□□□ -1.03
DDB1-217ENST00000540166 NCDNQ9UBB6 729 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 HIDE1A8MVS5 230 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 LINC01565O15544 149 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 MATN1P21941 496 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 ADORA2BP29275 332 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 IDUAP35475 653 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 CHRNB3Q05901 458 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 TNK2Q07912 1038 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 SELENBP1Q13228 472 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 RFTN1Q14699 578 aaPredicted RBP8.63□□□□□ -1.03
DDB1-217ENST00000540166 STILQ15468 1287 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 ZC3H14Q6PJT7 736 aaKnown RBP8.63□□□□□ -1.03
DDB1-217ENST00000540166 MTSS1LQ765P7 747 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 CEP68Q76N32 757 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 CDH24Q86UP0 819 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 SNX19Q92543 992 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 NXNL1Q96CM4 212 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 CASD1Q96PB1 797 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 KCTD14Q9BQ13 255 aaPredicted RBP8.63□□□□□ -1.03
DDB1-217ENST00000540166 NT5C1AQ9BXI3 368 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 BCO2Q9BYV7 579 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 TSPAN16Q9UKR8 245 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 PDE10AQ9Y233 779 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 TIMM13Q9Y5L4 95 aaPredicted RBP8.63□□□□□ -1.03
DDB1-217ENST00000540166 PMF1-BGLAPU3KQ54 211 aa8.63□□□□□ -1.03
DDB1-217ENST00000540166 MYO18AQ92614 2054 aaKnown RBP8.63□□□□□ -1.03
DDB1-217ENST00000540166 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.62□□□□□ -1.03
DDB1-217ENST00000540166 PNMA8CA0A1B0GUJ8 204 aa8.62□□□□□ -1.03
DDB1-217ENST00000540166 TRIM24O15164 1050 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms