RNA–Protein interactions for RNA: ENST00000539458.1

SLC3A2-213, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-213ENST00000539458 C1orf61Q13536 156 aa17.17■□□□□ 0.34
SLC3A2-213ENST00000539458 PYCR3Q53H96 274 aa17.17■□□□□ 0.34
SLC3A2-213ENST00000539458 ZNF648Q5T619 568 aaPredicted RBP17.17■□□□□ 0.34
SLC3A2-213ENST00000539458 GPRC6AQ5T6X5 926 aa17.17■□□□□ 0.34
SLC3A2-213ENST00000539458 HIBCHQ6NVY1 386 aaPredicted RBP17.17■□□□□ 0.34
SLC3A2-213ENST00000539458 GALNT13Q8IUC8 556 aa17.17■□□□□ 0.34
SLC3A2-213ENST00000539458 NXPE1Q8N323 547 aa17.17■□□□□ 0.34
SLC3A2-213ENST00000539458 EID2Q8N6I1 236 aa17.17■□□□□ 0.34
SLC3A2-213ENST00000539458 BBOF1Q8ND07 529 aa17.17■□□□□ 0.34
SLC3A2-213ENST00000539458 OR4C6Q8NH72 309 aa17.17■□□□□ 0.34
SLC3A2-213ENST00000539458 BAHD1Q8TBE0 780 aaPredicted RBP17.17■□□□□ 0.34
SLC3A2-213ENST00000539458 OR2M4Q96R27 311 aa17.17■□□□□ 0.34
SLC3A2-213ENST00000539458 TRIM31Q9BZY9 425 aa17.17■□□□□ 0.34
SLC3A2-213ENST00000539458 ZCCHC2Q9C0B9 1178 aaKnown RBP17.17■□□□□ 0.34
SLC3A2-213ENST00000539458 TMEM168Q9H0V1 697 aa17.17■□□□□ 0.34
SLC3A2-213ENST00000539458 SUDS3Q9H7L9 328 aaPredicted RBP17.17■□□□□ 0.34
SLC3A2-213ENST00000539458 TREX1Q9NSU2 369 aa17.17■□□□□ 0.34
SLC3A2-213ENST00000539458 SAMD15Q9P1V8 674 aa17.17■□□□□ 0.34
SLC3A2-213ENST00000539458 CRLS1Q9UJA2 301 aa17.17■□□□□ 0.34
SLC3A2-213ENST00000539458 TRBV5-4A0A0C4DH59 114 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 MAGEB16A2A368 324 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 CCDC162PA2VCL2 907 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 LMO7DNF2Z398 122 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 TPP1O14773 563 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 CHUKO15111 745 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 FFAR2O15552 330 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 CELA2BP08218 269 aaPredicted RBP17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 GIMD1P0DJR0 217 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 ZNF8P17098 575 aaPredicted RBP17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 RPL21P46778 160 aaKnown RBP17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 ITGA8P53708 1063 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 CACNG1Q06432 222 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 TMEM115Q12893 351 aaPredicted RBP17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 ILF3Q12906 894 aaKnown RBP eCLIP17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 LRP8Q14114 963 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 KHDC1Q4VXA5 237 aaKnown RBP17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 ZRANB3Q5FWF4 1079 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 N4BP2L1Q5TBK1 243 aaPredicted RBP17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 AFTPHQ6ULP2 937 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 GKN2Q86XP6 184 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 MPP5Q8N3R9 675 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 DEFB124Q8NES8 71 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 GPBAR1Q8TDU6 330 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 HDAC10Q969S8 669 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 TTC25Q96NG3 672 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 CAMK1GQ96NX5 476 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 DUSP23Q9BVJ7 150 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 RAB17Q9H0T7 212 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 FAM96AQ9H5X1 160 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 ZNHIT2Q9UHR6 403 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 ANAPC5Q9UJX4 755 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 SNX24Q9Y343 169 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 GPSM3Q9Y4H4 160 aa17.16■□□□□ 0.34
SLC3A2-213ENST00000539458 PLXNB3Q9ULL4 1909 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 CNOT1A5YKK6 2376 aaKnown RBP17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 CTAGE15A4D2H0 777 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 TRIM38O00635 465 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 YY2O15391 372 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 GRID2O43424 1007 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 CDK14O94921 469 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 GOT2P00505 430 aaKnown RBP17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 ANXA6P08133 673 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 CTAGE8P0CG41 777 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 MSH3P20585 1137 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 NMBRP28336 390 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 FOXN2P32314 431 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 PRAMEP78395 509 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 GTF2H3Q13889 308 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 DEFB133Q30KQ1 61 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 DNAJC21Q5F1R6 531 aaKnown RBP17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 DUPD1Q68J44 220 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 C8orf74Q6P047 294 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 CASC4Q6P4E1 433 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 LVRNQ6Q4G3 990 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 CTAGE6Q86UF2 777 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 CTAGE4Q8IX94 777 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 MMGT1Q8N4V1 131 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 SGSM3Q96HU1 749 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 CDC6Q99741 560 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 GSDMCQ9BYG8 508 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 WHRNQ9P202 907 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 FTSJ1Q9UET6 329 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 DOLKQ9UPQ8 538 aa17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 UTP11Q9Y3A2 253 aaKnown RBP17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 PCYT1BQ9Y5K3 369 aaPredicted RBP17.15■□□□□ 0.34
SLC3A2-213ENST00000539458 MAP1BP46821 2468 aaKnown RBP17.14■□□□□ 0.34
SLC3A2-213ENST00000539458 FAM237BA0A1B0GVD1 139 aa17.14■□□□□ 0.33
SLC3A2-213ENST00000539458 OR51F1A6NGY5 319 aa17.14■□□□□ 0.33
SLC3A2-213ENST00000539458 TP73O15350 636 aa17.14■□□□□ 0.33
SLC3A2-213ENST00000539458 CEACAM1P13688 526 aa17.14■□□□□ 0.33
SLC3A2-213ENST00000539458 ACRV1P26436 265 aa17.14■□□□□ 0.33
SLC3A2-213ENST00000539458 AKT1P31749 480 aa17.14■□□□□ 0.33
SLC3A2-213ENST00000539458 CDKN1CP49918 316 aaPredicted RBP17.14■□□□□ 0.33
SLC3A2-213ENST00000539458 NOVA1P51513 510 aaKnown RBP17.14■□□□□ 0.33
SLC3A2-213ENST00000539458 CTBSQ01459 385 aa17.14■□□□□ 0.33
SLC3A2-213ENST00000539458 CALCOCO2Q13137 446 aa17.14■□□□□ 0.33
SLC3A2-213ENST00000539458 TCEA2Q15560 299 aa17.14■□□□□ 0.33
SLC3A2-213ENST00000539458 PSAPL1Q6NUJ1 521 aa17.14■□□□□ 0.33
SLC3A2-213ENST00000539458 ZCCHC8Q6NZY4 707 aaKnown RBP17.14■□□□□ 0.33
SLC3A2-213ENST00000539458 MICALCLQ6ZW33 695 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms