RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 POLR1CO15160 346 aaPredicted RBP6.66□□□□□ -1.34
USP28-207ENST00000538475 RAD51BO15315 384 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 CA12O43570 354 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 FOXD2O60548 495 aaPredicted RBP6.66□□□□□ -1.34
USP28-207ENST00000538475 CCNKO75909 580 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 SEC24AO95486 1093 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 NADKO95544 446 aaPredicted RBP6.66□□□□□ -1.34
USP28-207ENST00000538475 CFBP00751 764 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 F13BP05160 661 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 THRBP10828 461 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 CDH1P12830 882 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 NME2P22392 152 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 ATP5F1P24539 256 aaPredicted RBP6.66□□□□□ -1.34
USP28-207ENST00000538475 ARNTP27540 789 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 HTR1EP28566 365 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 LRPAP1P30533 357 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 HOXA13P31271 388 aaPredicted RBP6.66□□□□□ -1.34
USP28-207ENST00000538475 IFNA8P32881 189 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 CA8P35219 290 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 SLC26A3P40879 764 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 RPS5P46782 204 aaKnown RBP6.66□□□□□ -1.34
USP28-207ENST00000538475 ST13P50502 369 aaKnown RBP6.66□□□□□ -1.34
USP28-207ENST00000538475 ARSFP54793 590 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 MLLT10P55197 1068 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 TAGLNQ01995 201 aaKnown RBP6.66□□□□□ -1.34
USP28-207ENST00000538475 ID3Q02535 119 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 TARDBPQ13148 414 aaKnown RBP eCLIP6.66□□□□□ -1.347e-8■■□□□ 14.2
USP28-207ENST00000538475 IKZF1Q13422 519 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 PRKG1Q13976 671 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 DPYSL2Q16555 572 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 TKFCQ3LXA3 575 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 AGKQ53H12 422 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 NDUFAF5Q5TEU4 345 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 RSBN1Q5VWQ0 802 aaPredicted RBP6.66□□□□□ -1.34
USP28-207ENST00000538475 MAP1SQ66K74 1059 aaPredicted RBP6.66□□□□□ -1.34
USP28-207ENST00000538475 FSTL4Q6MZW2 842 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 ZNF767PQ75MW2 155 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 BEND5Q7L4P6 421 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 LYSMD2Q8IV50 215 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 CCDC28AQ8IWP9 274 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 EXOC8Q8IYI6 725 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 CMTR2Q8IYT2 770 aaKnown RBP6.66□□□□□ -1.34
USP28-207ENST00000538475 PQLC3Q8N755 202 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 LSMEM1Q8N8F7 131 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 C3orf58Q8NDZ4 430 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 BPIFB6Q8NFQ5 453 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 JOSD2Q8TAC2 188 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 BPIFB1Q8TDL5 484 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 SEPT1Q8WYJ6 367 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 PIK3R3Q92569 461 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 RORBQ92753 470 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 PROX1Q92786 737 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 SDCCAG3Q96C92 435 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 YIPF6Q96EC8 236 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 ZNF560Q96MR9 790 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 PPP1R2P1Q96PQ5 205 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 NODALQ96S42 347 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 CDK5RAP1Q96SZ6 601 aaKnown RBP6.66□□□□□ -1.34
USP28-207ENST00000538475 APBA2Q99767 749 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 ADPGKQ9BRR6 497 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 CCDC32Q9BV29 185 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 C1QTNF1Q9BXJ1 281 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 NXF2Q9GZY0 626 aaKnown RBP6.66□□□□□ -1.34
USP28-207ENST00000538475 RNF38Q9H0F5 515 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 PCDHAC1Q9H158 963 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 ATXN3LQ9H3M9 355 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 SEMA6CQ9H3T2 930 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 DSN1Q9H410 356 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 RHOJQ9H4E5 214 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 RETREG1Q9H6L5 497 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 RPAP3Q9H6T3 665 aaPredicted RBP6.66□□□□□ -1.34
USP28-207ENST00000538475 C12orf49Q9H741 205 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 SYNDIG1Q9H7V2 258 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 RAVER2Q9HCJ3 691 aaKnown RBP6.66□□□□□ -1.34
USP28-207ENST00000538475 SACM1LQ9NTJ5 587 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.66□□□□□ -1.34
USP28-207ENST00000538475 PIM2Q9P1W9 311 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 TNFRSF10DQ9UBN6 386 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 PRKAG2Q9UGJ0 569 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 WARS2Q9UGM6 360 aaKnown RBP6.66□□□□□ -1.34
USP28-207ENST00000538475 ZDHHC2Q9UIJ5 367 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 OSGIN1Q9UJX0 560 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 NUP50Q9UKX7 468 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 OAZ3Q9UMX2 235 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 CAB39Q9Y376 341 aaPredicted RBP6.66□□□□□ -1.34
USP28-207ENST00000538475 TPRKBQ9Y3C4 175 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 PTPRJQ12913 1337 aa6.66□□□□□ -1.34
USP28-207ENST00000538475 TCRBV5S2A0A599 114 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 IFRD1O00458 451 aaPredicted RBP6.65□□□□□ -1.34
USP28-207ENST00000538475 NEMP1O14524 444 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 HAT1O14929 419 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 TMPRSS2O15393 492 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 NCAM2O15394 837 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 SLC16A6O15403 523 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 TEX28O15482 410 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 FBXO24O75426 580 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 SOAT2O75908 522 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 SEC24DO94855 1032 aaPredicted RBP6.65□□□□□ -1.34
USP28-207ENST00000538475 MED26O95402 600 aa6.65□□□□□ -1.34
USP28-207ENST00000538475 METTL18O95568 372 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms