RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 CHKBQ9Y259 395 aa7.93□□□□□ -1.14
CHFR-211ENST00000535897 DNAJC16Q9Y2G8 782 aa7.93□□□□□ -1.14
CHFR-211ENST00000535897 PPIL1Q9Y3C6 166 aa7.93□□□□□ -1.14
CHFR-211ENST00000535897 SCINQ9Y6U3 715 aa7.93□□□□□ -1.14
CHFR-211ENST00000535897 DOPEY1Q5JWR5 2465 aa7.93□□□□□ -1.14
CHFR-211ENST00000535897 ARGFXA6NJG6 315 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 LGALS16A8MUM7 142 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 C21orf140B9A014 251 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 NUAK1O60285 661 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 FZD6O60353 706 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 SPAG6O75602 509 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 SLC25A14O95258 325 aaPredicted RBP7.92□□□□□ -1.14
CHFR-211ENST00000535897 FGF5P12034 268 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 ATP1A3P13637 1013 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 ZNF8P17098 575 aaPredicted RBP7.92□□□□□ -1.14
CHFR-211ENST00000535897 CDK11BP21127 795 aaKnown RBP7.92□□□□□ -1.14
CHFR-211ENST00000535897 SSR1P43307 286 aaKnown RBP7.92□□□□□ -1.14
CHFR-211ENST00000535897 CAPZBP47756 277 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 ZNF165P49910 485 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 CCL11P51671 97 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 RPS18P62269 152 aaKnown RBP7.92□□□□□ -1.14
CHFR-211ENST00000535897 RPS15P62841 145 aaKnown RBP7.92□□□□□ -1.14
CHFR-211ENST00000535897 UBE2IP63279 158 aaKnown RBP7.92□□□□□ -1.14
CHFR-211ENST00000535897 PDE1BQ01064 536 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 DSC2Q02487 901 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 TUBB3Q13509 450 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 SEMA5AQ13591 1074 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 ESPL1Q14674 2120 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 DPYSL2Q16555 572 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 EIF2S3LQ2VIR3 472 aaKnown RBP7.92□□□□□ -1.14
CHFR-211ENST00000535897 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.92□□□□□ -1.14
CHFR-211ENST00000535897 BOLA3Q53S33 107 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 ZNF569Q5MCW4 686 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 ZNF648Q5T619 568 aaPredicted RBP7.92□□□□□ -1.14
CHFR-211ENST00000535897 HENMT1Q5T8I9 393 aaKnown RBP7.92□□□□□ -1.14
CHFR-211ENST00000535897 CPZQ66K79 652 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 ZNF787Q6DD87 383 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 POLNQ7Z5Q5 900 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 APLFQ8IW19 511 aaPredicted RBP7.92□□□□□ -1.14
CHFR-211ENST00000535897 TTC30BQ8N4P2 665 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 AOPEPQ8N6M6 819 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 SIDT2Q8NBJ9 832 aaKnown RBP7.92□□□□□ -1.14
CHFR-211ENST00000535897 THAP4Q8WY91 577 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 RSC1A1Q92681 617 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 CXorf40BQ96DE9 158 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 ZDHHC12Q96GR4 267 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 SPATA16Q9BXB7 569 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 SLC29A3Q9BZD2 475 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 BRD8Q9H0E9 1235 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 CARD9Q9H257 536 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 PCDH9Q9HC56 1237 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 MRPL47Q9HD33 250 aaKnown RBP7.92□□□□□ -1.14
CHFR-211ENST00000535897 LHX9Q9NQ69 397 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 RBM22Q9NW64 420 aaKnown RBP eCLIP7.92□□□□□ -1.14
CHFR-211ENST00000535897 CUEDC1Q9NWM3 386 aaPredicted RBP7.92□□□□□ -1.14
CHFR-211ENST00000535897 ATXN10Q9UBB4 475 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 TRIM10Q9UDY6 481 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 RARRES3Q9UL19 164 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 CNOT6Q9ULM6 557 aaKnown RBP7.92□□□□□ -1.14
CHFR-211ENST00000535897 G3BP2Q9UN86 482 aaKnown RBP7.92□□□□□ -1.14
CHFR-211ENST00000535897 PCDHGA6Q9Y5G7 932 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 SLC30A1Q9Y6M5 507 aa7.92□□□□□ -1.14
CHFR-211ENST00000535897 ANKRD17O75179 2603 aaKnown RBP7.92□□□□□ -1.14
CHFR-211ENST00000535897 OR52A4PA6NMU1 304 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 TIAF1O95411 115 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 DDAH2O95865 285 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 RECKO95980 971 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 FTLP02792 175 aaPredicted RBP7.91□□□□□ -1.14
CHFR-211ENST00000535897 RNF224P0DH78 156 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 RARAP10276 462 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 TCF4P15884 667 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 XRCC1P18887 633 aaPredicted RBP7.91□□□□□ -1.14
CHFR-211ENST00000535897 CES1P23141 567 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 RPL10P27635 214 aaKnown RBP7.91□□□□□ -1.14
CHFR-211ENST00000535897 COL8A1P27658 744 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 IL1R2P27930 398 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 PCK1P35558 622 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 SLC19A1P41440 591 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 SPINT3P49223 89 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 DRG2P55039 364 aaKnown RBP7.91□□□□□ -1.14
CHFR-211ENST00000535897 RPL26P61254 145 aaKnown RBP7.91□□□□□ -1.14
CHFR-211ENST00000535897 GPR18Q14330 331 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 KCNAB1Q14722 419 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 CHRNA6Q15825 494 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 ASIC2Q16515 512 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 PRR30Q53SZ7 412 aaPredicted RBP7.91□□□□□ -1.14
CHFR-211ENST00000535897 CCDC122Q5T0U0 273 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 TIGD7Q6NT04 549 aaPredicted RBP7.91□□□□□ -1.14
CHFR-211ENST00000535897 PWWP2BQ6NUJ5 590 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 FAM199XQ6PEV8 388 aaPredicted RBP7.91□□□□□ -1.14
CHFR-211ENST00000535897 PRSS42Q7Z5A4 293 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 TEX26Q8N6G2 289 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 MR1Q95460 341 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 TRIM11Q96F44 468 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 RUFY1Q96T51 708 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 MLPHQ9BV36 600 aaPredicted RBP7.91□□□□□ -1.14
CHFR-211ENST00000535897 GPR87Q9BY21 358 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 MFRPQ9BY79 579 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 ING2Q9H160 280 aa7.91□□□□□ -1.14
CHFR-211ENST00000535897 UCK1Q9HA47 277 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms