RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 KIR2DS5Q14953 304 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 GPR33Q49SQ1 333 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.72□□□□□ -0.85
NUP98-220ENST00000533346 AGAP9Q5VTM2 703 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 IYDQ6PHW0 289 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 ABRAXAS1Q6UWZ7 409 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 RBM44Q6ZP01 1051 aaKnown RBP9.72□□□□□ -0.85
NUP98-220ENST00000533346 C11orf96Q7Z7L8 435 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 TRIM74Q86UV6 250 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 ZNF547Q8IVP9 402 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 ZNF398Q8TD17 642 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 BLOC1S5Q8TDH9 187 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 HEXDCQ8WVB3 486 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 CCDC74AQ96AQ1 378 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 TMEM159Q96B96 161 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 LIN37Q96GY3 246 aaPredicted RBP9.72□□□□□ -0.85
NUP98-220ENST00000533346 SGSM3Q96HU1 749 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 ZNF514Q96K75 400 aaPredicted RBP9.72□□□□□ -0.85
NUP98-220ENST00000533346 LINC00615Q96LM1 132 aaPredicted RBP9.72□□□□□ -0.85
NUP98-220ENST00000533346 RANBP9Q96S59 729 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 DPYSL5Q9BPU6 564 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 B3GNT4Q9C0J1 378 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 KCNF1Q9H3M0 494 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 UCK1Q9HA47 277 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 SARS2Q9NP81 518 aaKnown RBP9.72□□□□□ -0.85
NUP98-220ENST00000533346 EIF2B3Q9NR50 452 aaKnown RBP9.72□□□□□ -0.85
NUP98-220ENST00000533346 PAK5Q9P286 719 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 LRIT1Q9P2V4 623 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 GULP1Q9UBP9 304 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 ZNHIT2Q9UHR6 403 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 RABGEF1Q9UJ41 708 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 MOSPD1Q9UJG1 213 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 ZMIZ1Q9ULJ6 1067 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 GPSM3Q9Y4H4 160 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 RNF215Q9Y6U7 377 aa9.72□□□□□ -0.85
NUP98-220ENST00000533346 TRBV5-4A0A0C4DH59 114 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 FAM149AA5PLN7 773 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 MROH6A6NGR9 719 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 AP3B1O00203 1094 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 PPM1DO15297 605 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 B4GAT1O43505 415 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 CSO75390 466 aaKnown RBP9.71□□□□□ -0.86
NUP98-220ENST00000533346 SRP72O76094 671 aaKnown RBP9.71□□□□□ -0.86
NUP98-220ENST00000533346 CDK14O94921 469 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 ECEL1O95672 775 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 FGGP02679 453 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 F3P13726 295 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 XRCC1P18887 633 aaPredicted RBP9.71□□□□□ -0.86
NUP98-220ENST00000533346 MSNP26038 577 aaKnown RBP9.71□□□□□ -0.86
NUP98-220ENST00000533346 ACTN2P35609 894 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 ZNF140P52738 457 aaPredicted RBP9.71□□□□□ -0.86
NUP98-220ENST00000533346 PDX1P52945 283 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 ERVPABLB-1P60509 514 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 GPLD1P80108 840 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 ACVR1Q04771 509 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 CDH17Q12864 832 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 SPIDRQ14159 915 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 CHRNA6Q15825 494 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 CYP1B1Q16678 543 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 ALS2CLQ60I27 953 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 DOK6Q6PKX4 331 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 CHST15Q7LFX5 561 aaPredicted RBP9.71□□□□□ -0.86
NUP98-220ENST00000533346 SPRED1Q7Z699 444 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 LRRTM4Q86VH4 590 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 SNIP1Q8TAD8 396 aaKnown RBP9.71□□□□□ -0.86
NUP98-220ENST00000533346 STYXQ8WUJ0 223 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 ATG4AQ8WYN0 398 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 SH3KBP1Q96B97 665 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 TMEM74Q96NL1 305 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 ZCCHC2Q9C0B9 1178 aaKnown RBP9.71□□□□□ -0.86
NUP98-220ENST00000533346 OR2AG1Q9H205 316 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 EPB41L1Q9H4G0 881 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 ETNK1Q9HBU6 452 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 BPIFA1Q9NP55 256 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 CASS4Q9NQ75 786 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 NLE1Q9NVX2 485 aaPredicted RBP9.71□□□□□ -0.86
NUP98-220ENST00000533346 PDP2Q9P2J9 529 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 ZNF148Q9UQR1 794 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 PLEKHM1Q9Y4G2 1056 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 ARL5AQ9Y689 179 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 ITPR1Q14643 2758 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 LAMA5O15230 3695 aa9.71□□□□□ -0.86
NUP98-220ENST00000533346 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.7□□□□□ -0.86
NUP98-220ENST00000533346 IGLV3-16A0A075B6K0 115 aa9.7□□□□□ -0.86
NUP98-220ENST00000533346 A0A087WV48 116 aa9.7□□□□□ -0.86
NUP98-220ENST00000533346 C17orf113A0A1B0GUU1 675 aa9.7□□□□□ -0.86
NUP98-220ENST00000533346 D6RAR5 112 aa9.7□□□□□ -0.86
NUP98-220ENST00000533346 CPNE6O95741 557 aa9.7□□□□□ -0.86
NUP98-220ENST00000533346 ZNF7P17097 686 aaPredicted RBP9.7□□□□□ -0.86
NUP98-220ENST00000533346 MAGEA6P43360 314 aa9.7□□□□□ -0.86
NUP98-220ENST00000533346 EPHA4P54764 986 aa9.7□□□□□ -0.86
NUP98-220ENST00000533346 CCL7P80098 99 aa9.7□□□□□ -0.86
NUP98-220ENST00000533346 CDK16Q00536 496 aa9.7□□□□□ -0.86
NUP98-220ENST00000533346 NFATC2Q13469 925 aa9.7□□□□□ -0.86
NUP98-220ENST00000533346 KHDC1Q4VXA5 237 aaKnown RBP9.7□□□□□ -0.86
NUP98-220ENST00000533346 CCDC157Q569K6 752 aa9.7□□□□□ -0.86
NUP98-220ENST00000533346 GPRC6AQ5T6X5 926 aa9.7□□□□□ -0.86
NUP98-220ENST00000533346 SLC30A9Q6PML9 568 aa9.7□□□□□ -0.86
NUP98-220ENST00000533346 SNX20Q7Z614 316 aa9.7□□□□□ -0.86
NUP98-220ENST00000533346 SLC9B2Q86UD5 537 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms