RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 UGT1A1P22309 533 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 UGT1A4P22310 534 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 UGT1A3P35503 534 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 UGT1A5P35504 534 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 PDX1P52945 283 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 PDE1BQ01064 536 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 ITGA9Q13797 1035 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 CRTC3Q6UUV7 619 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 ZNF438Q7Z4V0 828 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 SPRED1Q7Z699 444 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 LRRTM4Q86VH4 590 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 OR4K2Q8NGD2 314 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 GDAP1Q8TB36 358 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 GRAMD1AQ96CP6 724 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 GFM1Q96RP9 751 aaKnown RBP15.18■□□□□ 0.02
CPSF1-210ENST00000532935 UGT1A7Q9HAW7 530 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 UGT1A10Q9HAW8 530 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 UGT1A8Q9HAW9 530 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 TBC1D29Q9UFV1 150 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 ZKSCAN5Q9Y2L8 839 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 KCTD3Q9Y597 815 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 ENTPD2Q9Y5L3 495 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 URB1O60287 2271 aaKnown RBP15.18■□□□□ 0.02
CPSF1-210ENST00000532935 D6RAR5 112 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 KMOO15229 486 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 GPR39O43194 453 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 CEP104O60308 925 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 CDK14O94921 469 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 PRAMEF1O95521 474 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 AP2A1O95782 977 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 EML2O95834 649 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 IFNB1P01574 187 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 FGGP02679 453 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 CA5AP35218 305 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 ZNF140P52738 457 aaPredicted RBP15.17■□□□□ 0.02
CPSF1-210ENST00000532935 B4GALNT1Q00973 533 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 TMEM115Q12893 351 aaPredicted RBP15.17■□□□□ 0.02
CPSF1-210ENST00000532935 BIRC2Q13490 618 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 NR1D2Q14995 579 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 CCNG2Q16589 344 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 LDLRAP1Q5SW96 308 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 REXO1L1PQ8IX06 675 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 MAIP1Q8WWC4 291 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 ATXN7L3BQ96GX2 97 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 KCNF1Q9H3M0 494 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 SMOXQ9NWM0 555 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 FKBPLQ9UIM3 349 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 CFAP47Q6ZTR5 3102 aa15.17■□□□□ 0.02
CPSF1-210ENST00000532935 PIKFYVEQ9Y2I7 2098 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 TRBV23OR9-2A0A075B6M9 112 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 ESPNB1AK53 854 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 PPM1DO15297 605 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 BRINP1O60477 761 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 SNX2O60749 519 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 ETS1P14921 441 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 ZNF7P17097 686 aaPredicted RBP15.16■□□□□ 0.02
CPSF1-210ENST00000532935 CXCR5P32302 372 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 ACTN2P35609 894 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 FDFT1P37268 417 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 CLCNKAP51800 687 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 OR1D5P58170 312 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 GTF2H3Q13889 308 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 INSCQ1MX18 579 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 PLA2G4EQ3MJ16 856 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 DRICH1Q6PGQ1 229 aaPredicted RBP15.16■□□□□ 0.02
CPSF1-210ENST00000532935 ZNF547Q8IVP9 402 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 SFRP1Q8N474 314 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 CCDC89Q8N998 374 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 DDHD1Q8NEL9 900 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 OR13C4Q8NGS5 318 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 ZNF398Q8TD17 642 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 SLC37A2Q8TED4 501 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 TTC25Q96NG3 672 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 C19orf43Q9BQ61 176 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 TIMM29Q9BSF4 260 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 ZCCHC2Q9C0B9 1178 aaKnown RBP15.16■□□□□ 0.02
CPSF1-210ENST00000532935 POLR1BQ9H9Y6 1135 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 ETNK1Q9HBU6 452 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 KLC4Q9NSK0 619 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 SLC23A2Q9UGH3 650 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 ATXN7L1Q9ULK2 861 aaPredicted RBP15.16■□□□□ 0.02
CPSF1-210ENST00000532935 JRKLQ9Y4A0 524 aa15.16■□□□□ 0.02
CPSF1-210ENST00000532935 ITPR1Q14643 2758 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 A6NCN8 305 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 ERI2A8K979 691 aaKnown RBP15.15■□□□□ 0.02
CPSF1-210ENST00000532935 ZW10O43264 779 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 ZSCAN12O43309 604 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 B4GAT1O43505 415 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 LDB2O43679 373 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 SRP72O76094 671 aaKnown RBP15.15■□□□□ 0.02
CPSF1-210ENST00000532935 MPOP05164 745 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 TPH1P17752 444 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 MSNP26038 577 aaKnown RBP15.15■□□□□ 0.02
CPSF1-210ENST00000532935 ALDH4A1P30038 563 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 HADHAP40939 763 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 GPR3P46089 330 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 FASLGP48023 281 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 LSSP48449 732 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 GABREP78334 506 aa15.15■□□□□ 0.02
CPSF1-210ENST00000532935 TMPRSS15P98073 1019 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms