RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 GALNT5Q7Z7M9 940 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 OR2T12Q8NG77 320 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 BRI3BPQ8WY22 251 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 RSPH1Q8WYR4 309 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 CDKN2AIPNLQ96HQ2 116 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 CMTM6Q9NX76 183 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 BOLA2-SMG1P6H3BVE0 249 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 KPNA6O60684 536 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 EIF2B2P49770 351 aaKnown RBP11.25□□□□□ -0.61
NXF1-211ENST00000531709 CCT8P50990 548 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 PIGFQ07326 219 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 MAP2K5Q13163 448 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 PMS2P3Q13401 168 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 FGD3Q5JSP0 725 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 LINGO4Q6UY18 593 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 PLD3Q8IV08 490 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 NCSTNQ92542 709 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 BORCS5Q969J3 196 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 BIRC7Q96CA5 298 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 UGT2B28Q9BY64 529 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 EPB41L1Q9H4G0 881 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 PARVBQ9HBI1 364 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 SLAMF8Q9P0V8 285 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 TMEM181Q9P2C4 612 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 SEPT3Q9UH03 358 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 ACTL7AQ9Y615 435 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 A0A0U1RQS6 177 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 C8BP07358 591 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 ANXA6P08133 673 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 CD1DP15813 335 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 ZNF37AP17032 561 aaPredicted RBP11.25□□□□□ -0.61
NXF1-211ENST00000531709 SLC6A2P23975 617 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 PRDX3P30048 256 aaKnown RBP11.25□□□□□ -0.61
NXF1-211ENST00000531709 SLC11A2P49281 568 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 ACADVLP49748 655 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 CLK1P49759 484 aaKnown RBP11.25□□□□□ -0.61
NXF1-211ENST00000531709 ATP6V0D1P61421 351 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 RAB39AQ14964 217 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 RGS21Q2M5E4 152 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 AGMOQ6ZNB7 445 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 LARP4Q71RC2 724 aaKnown RBP eCLIP11.25□□□□□ -0.61
NXF1-211ENST00000531709 TM6SF2Q9BZW4 377 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 RAD21L1Q9H4I0 556 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 ACTR8Q9H981 624 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 TRNAU1APQ9NX07 287 aaKnown RBP11.25□□□□□ -0.61
NXF1-211ENST00000531709 CRLS1Q9UJA2 301 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 VPS9D1Q9Y2B5 631 aa11.25□□□□□ -0.61
NXF1-211ENST00000531709 A0A1W2PP18 115 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 NT5C1B-RDH14C9J2C7 533 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 ITGB1P05556 798 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 PKMP14618 531 aaKnown RBP11.24□□□□□ -0.61
NXF1-211ENST00000531709 IL7RP16871 459 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 TUBA4AP68366 448 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 TXNL4AP83876 142 aaKnown RBP11.24□□□□□ -0.61
NXF1-211ENST00000531709 SPIDRQ14159 915 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 SIM2Q14190 667 aaPredicted RBP11.24□□□□□ -0.61
NXF1-211ENST00000531709 CPSF6Q16630 551 aaKnown RBP eCLIP11.24□□□□□ -0.61
NXF1-211ENST00000531709 EGFLAMQ63HQ2 1017 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 DENND1CQ8IV53 801 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 EID3Q8N140 333 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 BRSK1Q8TDC3 778 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 HIPK3Q9H422 1215 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 FKBPLQ9UIM3 349 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 USP22Q9UPT9 525 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 PCDHB9Q9Y5E1 797 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 AP1G1O43747 822 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 TLR5O60602 858 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 LRATO95237 230 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 THRBP10828 461 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 HOXB8P17481 243 aaPredicted RBP11.24□□□□□ -0.61
NXF1-211ENST00000531709 PRKACGP22612 351 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 GJA5P36382 358 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 IST1P53990 364 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 HUNKP57058 714 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 AARS2Q5JTZ9 985 aaKnown RBP11.24□□□□□ -0.61
NXF1-211ENST00000531709 CCNYL2Q5T2Q4 361 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 TTC23Q5W5X9 447 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 NANOGP8Q6NSW7 305 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 CARNMT1Q8N4J0 409 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 TERB1Q8NA31 727 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 TFAP2CQ92754 450 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 IMP4Q96G21 291 aaKnown RBP11.24□□□□□ -0.61
NXF1-211ENST00000531709 BTN2A3PQ96KV6 586 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 ADGRE3Q9BY15 652 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 NANOGQ9H9S0 305 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 TREX1Q9NSU2 369 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 CNOT11Q9UKZ1 510 aaKnown RBP11.24□□□□□ -0.61
NXF1-211ENST00000531709 TCRBV3S1A0A5B6 114 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 PBX3P40426 434 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 PIK3R6Q5UE93 754 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 SMYD5Q6GMV2 418 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 HMBOX1Q6NT76 420 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 UGT3A1Q6NUS8 523 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 FUNDC1Q8IVP5 155 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 OR13J1Q8NGT2 312 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 TMBIM1Q969X1 311 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 TSPAN18Q96SJ8 248 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 ANKRD60Q9BZ19 345 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 ASPSCR1Q9BZE9 553 aa11.24□□□□□ -0.61
NXF1-211ENST00000531709 SMOC2Q9H3U7 446 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms