RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 GALNT4Q8N4A0 578 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 OR4L1Q8NH43 312 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 PLD4Q96BZ4 506 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 ZNF558Q96NG5 402 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 ZNF599Q96NL3 588 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 PSKH2Q96QS6 385 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 BPIFA1Q9NP55 256 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 PTBP2Q9UKA9 531 aaKnown RBP11.49□□□□□ -0.57
USP35-207ENST00000530546 AP4S1Q9Y587 144 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 TBL1XO60907 577 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 C1RP00736 705 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 PIK3R1P27986 724 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 MZF1P28698 734 aaPredicted RBP11.49□□□□□ -0.57
USP35-207ENST00000530546 FMO4P31512 558 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 TNK2Q07912 1038 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 KRT80Q6KB66 452 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 LILRA2Q8N149 483 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 KDM1BQ8NB78 822 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 TBC1D15Q8TC07 691 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 ADAMTS16Q8TE57 1224 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 CDKN2AIPNLQ96HQ2 116 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 ZBED2Q9BTP6 218 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 TNFRSF12AQ9NP84 129 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 TMEM39AQ9NV64 488 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 EBF1Q9UH73 591 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 FAM50BQ9Y247 325 aa11.49□□□□□ -0.57
USP35-207ENST00000530546 A0A087WXM4 84 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 A0A1B0GVM2 712 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 TCAF2A6NFQ2 919 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 IPO13O94829 963 aaKnown RBP11.48□□□□□ -0.57
USP35-207ENST00000530546 ZNF26P17031 533 aaPredicted RBP11.48□□□□□ -0.57
USP35-207ENST00000530546 CDKN1CP49918 316 aaPredicted RBP11.48□□□□□ -0.57
USP35-207ENST00000530546 C5orf22Q49AR2 442 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 TXNDC8Q6A555 127 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 FAM45BPQ6NSW5 357 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 NANOGP8Q6NSW7 305 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 PIWIL4Q7Z3Z4 852 aaKnown RBP11.48□□□□□ -0.57
USP35-207ENST00000530546 ARL14EPQ8N8R7 260 aaPredicted RBP11.48□□□□□ -0.57
USP35-207ENST00000530546 FAM45AQ8TCE6 357 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 TRIB3Q96RU7 358 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 DOK1Q99704 481 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 PKP2Q99959 881 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 KLF16Q9BXK1 252 aaPredicted RBP11.48□□□□□ -0.57
USP35-207ENST00000530546 TDRD1Q9BXT4 1180 aaKnown RBP11.48□□□□□ -0.57
USP35-207ENST00000530546 SEZ6LQ9BYH1 1024 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 TPK1Q9H3S4 243 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 CAAP1Q9H8G2 361 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 OGDHLQ9ULD0 1010 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 RAI2Q9Y5P3 530 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 A0A1B0GTW7 788 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 ILVBLA1L0T0 632 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 SUPT7LO94864 414 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 ABLIM3O94929 683 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 STAMBPO95630 424 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 EPOP01588 193 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 RBP1P09455 135 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 DNAJB1P25685 340 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 PAF1Q8N7H5 531 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 TMEM102Q8N9M5 508 aaPredicted RBP11.48□□□□□ -0.57
USP35-207ENST00000530546 MDGA1Q8NFP4 955 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 PTERQ96BW5 349 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 UBXN10Q96LJ8 280 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 OLAHQ9NV23 265 aa11.48□□□□□ -0.57
USP35-207ENST00000530546 FNDC1Q4ZHG4 1894 aaPredicted RBP11.47□□□□□ -0.57
USP35-207ENST00000530546 NPHS1O60500 1241 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 URODP06132 367 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 UGT1A6P19224 532 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 UGT1A1P22309 533 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 UGT1A4P22310 534 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 UGT1A3P35503 534 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 UGT1A5P35504 534 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 NUDT2P50583 147 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 CDH13P55290 713 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 ARF5P84085 180 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 ACAP2Q15057 778 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 FBXO48Q5FWF7 155 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 CXorf57Q6NSI4 855 aaKnown RBP11.47□□□□□ -0.57
USP35-207ENST00000530546 BNC2Q6ZN30 1099 aaPredicted RBP11.47□□□□□ -0.57
USP35-207ENST00000530546 OR6K2Q8NGY2 324 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 TRUB1Q8WWH5 349 aaKnown RBP11.47□□□□□ -0.57
USP35-207ENST00000530546 ARPC5LQ9BPX5 153 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 ZNF334Q9HCZ1 680 aaPredicted RBP11.47□□□□□ -0.57
USP35-207ENST00000530546 VTI1BQ9UEU0 232 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 FCF1Q9Y324 198 aaKnown RBP11.47□□□□□ -0.57
USP35-207ENST00000530546 SLC30A1Q9Y6M5 507 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 LRRC14BA6NHZ5 514 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 CFLARO15519 480 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 RHOBTB1O94844 696 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 EFEMP2O95967 443 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 PTPN2P17706 415 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 PIGGQ5H8A4 983 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 ATXN7L2Q5T6C5 722 aaPredicted RBP11.47□□□□□ -0.57
USP35-207ENST00000530546 METTL21CQ5VZV1 264 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 CLEC6AQ6EIG7 209 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 CNKSR3Q6P9H4 555 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 ANKRD33Q7Z3H0 272 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 ISCA2Q86U28 154 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 CUZD1Q86UP6 607 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 SLC39A11Q8N1S5 342 aa11.47□□□□□ -0.57
USP35-207ENST00000530546 SNX31Q8N9S9 440 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms