RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 DKK4Q9UBT3 224 aa8.99□□□□□ -0.97
CMTM1-210ENST00000528441 FAM8A1Q9UBU6 413 aa8.99□□□□□ -0.97
CMTM1-210ENST00000528441 KLHL3Q9UH77 587 aa8.99□□□□□ -0.97
CMTM1-210ENST00000528441 CRLS1Q9UJA2 301 aa8.99□□□□□ -0.97
CMTM1-210ENST00000528441 REXO2Q9Y3B8 237 aaKnown RBP8.99□□□□□ -0.97
CMTM1-210ENST00000528441 LOXL2Q9Y4K0 774 aa8.99□□□□□ -0.97
CMTM1-210ENST00000528441 OAS3Q9Y6K5 1087 aaKnown RBP8.99□□□□□ -0.97
CMTM1-210ENST00000528441 GLYATL1P3A0A0U1RQE8 302 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 A8MU76 341 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 PLD2O14939 933 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 KMOO15229 486 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 CASC3O15234 703 aaKnown RBP8.98□□□□□ -0.97
CMTM1-210ENST00000528441 CRTAMO95727 393 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 CPNE6O95741 557 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 SOD1P00441 154 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 AGTP01019 485 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 VIPP01282 170 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 IFNB1P01574 187 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 CCDC175P0C221 793 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 PYGMP11217 842 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 HGFP14210 728 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 PNLIPP16233 465 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 ZNF8P17098 575 aaPredicted RBP8.98□□□□□ -0.97
CMTM1-210ENST00000528441 BPIP17213 487 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 AMD1P17707 334 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 MPSTP25325 297 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 CSTF2P33240 577 aaKnown RBP eCLIP8.98□□□□□ -0.97
CMTM1-210ENST00000528441 CD68P34810 354 aaPredicted RBP8.98□□□□□ -0.97
CMTM1-210ENST00000528441 EIF2S3P41091 472 aaKnown RBP8.98□□□□□ -0.97
CMTM1-210ENST00000528441 HALP42357 657 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 DCDC1P59894 354 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 EIF3IQ13347 325 aaKnown RBP8.98□□□□□ -0.97
CMTM1-210ENST00000528441 IHHQ14623 411 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 SLC1A5Q15758 541 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 TAZQ16635 292 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 TMEM164Q5U3C3 297 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 NKAIN2Q5VXU1 208 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 PDPK2PQ6A1A2 396 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 DET1Q7L5Y6 550 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 TMC3Q7Z5M5 1100 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 B3GNT8Q7Z7M8 397 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 PDZD3Q86UT5 571 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 NLRP8Q86W28 1048 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 FAM129CQ86XR2 697 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 NRROSQ86YC3 692 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 SLC37A2Q8TED4 501 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 ANP32BQ92688 251 aaKnown RBP8.98□□□□□ -0.97
CMTM1-210ENST00000528441 SH3KBP1Q96B97 665 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 CXorf40BQ96DE9 158 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 DCUN1D1Q96GG9 259 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 PRR11Q96HE9 360 aaPredicted RBP8.98□□□□□ -0.97
CMTM1-210ENST00000528441 OXNAD1Q96HP4 312 aaPredicted RBP8.98□□□□□ -0.97
CMTM1-210ENST00000528441 COX14Q96I36 57 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 MRGPRX2Q96LB1 330 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 SPATA13Q96N96 652 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 FCRL3Q96P31 734 aaPredicted RBP8.98□□□□□ -0.97
CMTM1-210ENST00000528441 TRIB3Q96RU7 358 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 TBL1YQ9BQ87 522 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 HERPUD2Q9BSE4 406 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 TRIM39Q9HCM9 518 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 ATXN10Q9UBB4 475 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 APPL1Q9UKG1 709 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 PCDHB11Q9Y5F2 797 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 SPO11Q9Y5K1 396 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 ZFC3H1O60293 1989 aaKnown RBP8.98□□□□□ -0.97
CMTM1-210ENST00000528441 ASXL3Q9C0F0 2248 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 IGF2RP11717 2491 aa8.98□□□□□ -0.97
CMTM1-210ENST00000528441 ARHGEF17Q96PE2 2063 aaPredicted RBP8.98□□□□□ -0.97
CMTM1-210ENST00000528441 CEP295Q9C0D2 2601 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 A0A1W2PQM1 296 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 AURKAO14965 403 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 ARHGAP6O43182 974 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 NUAK1O60285 661 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 RALBP11234 206 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 IDSP22304 550 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 FECHP22830 423 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 ITPKBP27987 946 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 ERVPABLB-1P60509 514 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 SPARCL1Q14515 664 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 KRT33BQ14525 404 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 PLCL1Q15111 1095 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 RPS6KA1Q15418 735 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 P3H1Q32P28 736 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 LDLRAP1Q5SW96 308 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 OGFOD3Q6PK18 319 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 KDELC1Q6UW63 502 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 PPP1R21Q6ZMI0 780 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 NAGSQ8N159 534 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 TTC30BQ8N4P2 665 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 CCDC89Q8N998 374 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 DNAAF3Q8N9W5 541 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 FAM71DQ8N9W8 422 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 AVL9Q8NBF6 648 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 RCBTB1Q8NDN9 531 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 SNIP1Q8TAD8 396 aaKnown RBP8.97□□□□□ -0.97
CMTM1-210ENST00000528441 BRSK1Q8TDC3 778 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 NCSTNQ92542 709 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 ALG3Q92685 438 aa8.97□□□□□ -0.97
CMTM1-210ENST00000528441 LIN37Q96GY3 246 aaPredicted RBP8.97□□□□□ -0.97
CMTM1-210ENST00000528441 PLEKHG4BQ96PX9 1271 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms