RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 YY2O15391 372 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 ZNF500O60304 480 aaPredicted RBP10.87□□□□□ -0.67
NEDD8-204ENST00000526430 PCDH8O95206 1070 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 CLDN1O95832 211 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 GM2AP17900 193 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 GRNP28799 593 aaKnown RBP10.87□□□□□ -0.67
NEDD8-204ENST00000526430 RPL22P35268 128 aaKnown RBP10.87□□□□□ -0.67
NEDD8-204ENST00000526430 ADRA1AP35348 466 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 CD86P42081 329 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 PFN3P60673 137 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 RPS21P63220 83 aaKnown RBP10.87□□□□□ -0.67
NEDD8-204ENST00000526430 OLIG2Q13516 323 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 TPRG1LQ5T0D9 272 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 DENND5AQ6IQ26 1287 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 ERN2Q76MJ5 926 aaKnown RBP10.87□□□□□ -0.67
NEDD8-204ENST00000526430 ZNF572Q7Z3I7 529 aaPredicted RBP10.87□□□□□ -0.67
NEDD8-204ENST00000526430 SLITRK4Q8IW52 837 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 SRRM1Q8IYB3 904 aaKnown RBP10.87□□□□□ -0.67
NEDD8-204ENST00000526430 RBFAQ8N0V3 343 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 RYBPQ8N488 228 aaPredicted RBP10.87□□□□□ -0.67
NEDD8-204ENST00000526430 IL22RA1Q8N6P7 574 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 KYQ8NBH2 561 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 NSMCE1Q8WV22 266 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 MAIP1Q8WWC4 291 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 MRGPRX2Q96LB1 330 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 SPATA13Q96N96 652 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 LENG8Q96PV6 779 aaPredicted RBP10.87□□□□□ -0.67
NEDD8-204ENST00000526430 RBM15Q96T37 977 aaKnown RBP eCLIP10.87□□□□□ -0.678e-6■□□□□ 8.4
NEDD8-204ENST00000526430 TDRD1Q9BXT4 1180 aaKnown RBP10.87□□□□□ -0.67
NEDD8-204ENST00000526430 PRDM8Q9NQV8 689 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 UBP1Q9NZI7 540 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 TRHDEQ9UKU6 1024 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 ZNF148Q9UQR1 794 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 PCDHGA3Q9Y5H0 932 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 FBN3Q75N90 2809 aa10.87□□□□□ -0.67
NEDD8-204ENST00000526430 CSMD2Q7Z408 3487 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.86□□□□□ -0.67
NEDD8-204ENST00000526430 CFAP69A5D8W1 941 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 F5H423 210 aaPredicted RBP10.86□□□□□ -0.67
NEDD8-204ENST00000526430 FPGTO14772 594 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 PHF2O75151 1096 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 PGLSO95336 258 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 CES1P23141 567 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 IVDP26440 423 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 PSMB4P28070 264 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 ITKQ08881 620 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 CDC20Q12834 499 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 RALGDSQ12967 914 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 SEPT6Q14141 434 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 PTK2BQ14289 1009 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 SLC14A2Q15849 920 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 UGP2Q16851 508 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 PARP6Q2NL67 630 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 LRRC73Q5JTD7 316 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 TCTN3Q6NUS6 607 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 RANBP10Q6VN20 620 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 CCNJLQ8IV13 435 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 PHACTR4Q8IZ21 702 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 FSTL5Q8N475 847 aaPredicted RBP10.86□□□□□ -0.67
NEDD8-204ENST00000526430 EFCAB3Q8N7B9 438 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 TEX19Q8NA77 164 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 DENND6BQ8NEG7 585 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 ATL2Q8NHH9 583 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 SCG3Q8WXD2 468 aaKnown RBP10.86□□□□□ -0.67
NEDD8-204ENST00000526430 MAGOHBQ96A72 148 aaKnown RBP10.86□□□□□ -0.67
NEDD8-204ENST00000526430 EID2BQ96D98 161 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 CCDC114Q96M63 670 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 KLF6Q99612 283 aaPredicted RBP10.86□□□□□ -0.67
NEDD8-204ENST00000526430 OSBPL1AQ9BXW6 950 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 SLC13A1Q9BZW2 595 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 CLPBQ9H078 707 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 DDX47Q9H0S4 455 aaKnown RBP10.86□□□□□ -0.67
NEDD8-204ENST00000526430 GBA3Q9H227 469 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 TCEAL2Q9H3H9 227 aaPredicted RBP10.86□□□□□ -0.67
NEDD8-204ENST00000526430 DYRK4Q9NR20 520 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 RNF14Q9UBS8 474 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 CDC23Q9UJX2 597 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 APPL1Q9UKG1 709 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 CHKBQ9Y259 395 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 TP53TG5Q9Y2B4 290 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 FARP1Q9Y4F1 1045 aaPredicted RBP10.86□□□□□ -0.67
NEDD8-204ENST00000526430 FADS3Q9Y5Q0 445 aa10.86□□□□□ -0.67
NEDD8-204ENST00000526430 RAD51BO15315 384 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 TP73O15350 636 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 SOCS5O75159 536 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 PAK4O96013 591 aaPredicted RBP10.85□□□□□ -0.67
NEDD8-204ENST00000526430 AGTP01019 485 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 TUBB4AP04350 444 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 ADRB3P13945 408 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 PNLIPP16233 465 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 TSHRP16473 764 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 UGT1A3P35503 534 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 CHRNA4P43681 627 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 ARSDP51689 593 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 BCL2L1Q07817 233 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 C1orf61Q13536 156 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 GRM3Q14832 879 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 QPCTQ16769 361 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 P3H1Q32P28 736 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 CRTC2Q53ET0 693 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms