RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 KLRC2P26717 231 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 RBL1P28749 1068 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 LRPAP1P30533 357 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 SSTR4P31391 388 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 PCGF2P35227 344 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 CHRNA7P36544 502 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 CLK3P49761 638 aaKnown RBP4.46□□□□□ -1.7
CD44-213ENST00000525209 GNAQP50148 359 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 PGDP52209 483 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 SMSP52788 366 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 MTTPP55157 894 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 TAS2R40P59535 323 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 PTENP60484 403 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 LIPEQ05469 1076 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 ACSM2AQ08AH3 577 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 MTX1Q13505 466 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 LAMB3Q13751 1172 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 PDE7AQ13946 482 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 RRP1BQ14684 758 aaKnown RBP4.46□□□□□ -1.7
CD44-213ENST00000525209 PTPRCAPQ14761 206 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 VEPH1Q14D04 833 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 WDR43Q15061 677 aaKnown RBP eCLIP4.46□□□□□ -1.7
CD44-213ENST00000525209 SLC18A3Q16572 532 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 CDO1Q16878 200 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 SLC36A3Q495N2 470 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 BCL7AQ4VC05 210 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 ARHGEF16Q5VV41 709 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 ACSM2BQ68CK6 577 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 CCDC144NLQ6NUI1 221 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 GJB7Q6PEY0 223 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 TMEM182Q6ZP80 229 aaPredicted RBP4.46□□□□□ -1.7
CD44-213ENST00000525209 KRT27Q7Z3Y8 459 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 BIVMQ86UB2 503 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 SLCO6A1Q86UG4 719 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 RTN4RL2Q86UN3 420 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 LUZP1Q86V48 1076 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 RASAL3Q86YV0 1011 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 IGDCC3Q8IVU1 814 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 LRRC56Q8IYG6 542 aaPredicted RBP4.46□□□□□ -1.7
CD44-213ENST00000525209 SPARTQ8N0X7 666 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 BCL6BQ8N143 479 aaPredicted RBP4.46□□□□□ -1.7
CD44-213ENST00000525209 Q8NA96 180 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 HJURPQ8NCD3 748 aaPredicted RBP4.46□□□□□ -1.7
CD44-213ENST00000525209 OR10T2Q8NGX3 314 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 SLC22A8Q8TCC7 542 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 IGDCC4Q8TDY8 1250 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 CLEC4CQ8WTT0 213 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 ANKRD7Q92527 254 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 APBB2Q92870 758 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 DVL3Q92997 716 aaPredicted RBP4.46□□□□□ -1.7
CD44-213ENST00000525209 RASD2Q96D21 266 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 AJUBAQ96IF1 538 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 SLC46A1Q96NT5 459 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 LMF1Q96S06 567 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 VKORC1Q9BQB6 163 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 PINK1Q9BXM7 581 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 CDT1Q9H211 546 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 SYNDIG1Q9H7V2 258 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 MINDY3Q9H8M7 445 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 EVA1AQ9H8M9 152 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 RANGRFQ9HD47 186 aaPredicted RBP4.46□□□□□ -1.7
CD44-213ENST00000525209 SLC22A11Q9NSA0 550 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 ETNK2Q9NVF9 386 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 MRPS18AQ9NVS2 196 aaKnown RBP4.46□□□□□ -1.7
CD44-213ENST00000525209 HYPKQ9NX55 129 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 OR6C3Q9NZP0 311 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 CHMP5Q9NZZ3 219 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 SPATA7Q9P0W8 599 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 SAE1Q9UBE0 346 aaPredicted RBP4.46□□□□□ -1.7
CD44-213ENST00000525209 KLQ9UEF7 1012 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 DUSP13Q9UII6 198 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 ANGPTL2Q9UKU9 493 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 KIAA1257Q9ULG3 409 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 SIT1Q9Y3P8 196 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 MFHAS1Q9Y4C4 1052 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 BIVM-ERCC5R4GMW8 1640 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 PTCH1Q13635 1447 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 PTPRMP28827 1452 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 TRAV6A0A075B6T7 132 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 LOC100506127A0A0U1RQW1 187 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 A0A1B0GTQ1 180 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 NPIPB5A8MRT5 1133 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 USP17L23D6RBM5 183 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 SPECC1L-ADORA2AF8WAN1 911 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 K7ERQ8 282 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 IFNL4K9M1U5 179 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 M0QZQ0 153 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 HRKO00198 91 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 TLR4O00206 839 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 XPO1O14980 1071 aaKnown RBP4.45□□□□□ -1.7
CD44-213ENST00000525209 CHADO15335 359 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 B4GALT2O60909 372 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 HSF2BPO75031 334 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 CRCPO75575 148 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 TOM1L1O75674 476 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 CDKL5O76039 1030 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 HAUS5O94927 633 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 CXCL10P02778 98 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 CSF1RP07333 972 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 IQCF3P0C7M6 154 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms