RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 DMAC2Q9NW81 257 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 IPO11Q9UI26 975 aaKnown RBP6.4□□□□□ -1.38
VPS13B-211ENST00000522802 SLC25A13Q9UJS0 675 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 RNF215Q9Y6U7 377 aa6.4□□□□□ -1.38
VPS13B-211ENST00000522802 TACC2O95359 2948 aa6.4□□□□□ -1.39
VPS13B-211ENST00000522802 ESPL1Q14674 2120 aa6.4□□□□□ -1.39
VPS13B-211ENST00000522802 DCHS2Q6V1P9 2916 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 UBA6A0AVT1 1052 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-211ENST00000522802 WIPF3A6NGB9 483 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 IGLON5A6NGN9 336 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 TMX2-CTNND1H3BSU7 103 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 FPGTO14772 594 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 VPS4BO75351 444 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 MT-CO1P00395 513 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 NR3C1P04150 777 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 SRCP12931 536 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 ADRB3P13945 408 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 CPEP16870 476 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 CD40P25942 277 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 CD82P27701 267 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 LSP1P33241 339 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 UGT1A3P35503 534 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 KCNC1P48547 511 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 PLK1P53350 603 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 SLC8A3P57103 927 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 RPS21P63220 83 aaKnown RBP6.39□□□□□ -1.39
VPS13B-211ENST00000522802 PITX1P78337 314 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-211ENST00000522802 AMPD3Q01432 767 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 SULT2A1Q06520 285 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 KIAA1161Q6NSJ0 714 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 SPRED1Q7Z699 444 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 SCML4Q8N228 414 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 ZNF610Q8N9Z0 462 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 NUDT10Q8NFP7 164 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 AZIN2Q96A70 460 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 NUDT11Q96G61 164 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 KCNC2Q96PR1 638 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 PSMB7Q99436 277 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 CMKLR1Q99788 373 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 PRMT1Q99873 361 aaKnown RBP6.39□□□□□ -1.39
VPS13B-211ENST00000522802 BLZF1Q9H2G9 400 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 RDH14Q9HBH5 336 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 CNGB3Q9NQW8 809 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 VPS4AQ9UN37 437 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 OR51B4Q9Y5P0 310 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 FADS3Q9Y5Q0 445 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 HS3ST3A1Q9Y663 406 aa6.39□□□□□ -1.39
VPS13B-211ENST00000522802 C9orf118A6NHY6 69 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 F5H5T6 163 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 O00370 1275 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 IKBKBO14920 756 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 SMAD6O43541 496 aaKnown RBP6.38□□□□□ -1.39
VPS13B-211ENST00000522802 SNAP91O60641 907 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 CNTN5O94779 1100 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 CALCAP01258 141 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 SETSIPP0DME0 302 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 FGF3P11487 239 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-211ENST00000522802 PRF1P14222 555 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 RRM1P23921 792 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 APEX1P27695 318 aaKnown RBP6.38□□□□□ -1.39
VPS13B-211ENST00000522802 VAMP7P51809 220 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 NEK3P51956 506 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 THOP1P52888 689 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 SLC6A3Q01959 620 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 SLC12A1Q13621 1099 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 PTK2BQ14289 1009 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 ALG11Q2TAA5 492 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 DEFB109BQ30KR1 87 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 MAP9Q49MG5 647 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 FAXCQ5TGI0 409 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 PMF1Q6P1K2 205 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 C22orf39Q6P5X5 142 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 LINGO4Q6UY18 593 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 MACC1Q6ZN28 852 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 LHFPL2Q6ZUX7 228 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 UNC13DQ70J99 1090 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 PARS2Q7L3T8 475 aaKnown RBP6.38□□□□□ -1.39
VPS13B-211ENST00000522802 VPS36Q86VN1 386 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 PHYKPLQ8IUZ5 450 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 UNC5BQ8IZJ1 945 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 CACNA2D3Q8IZS8 1091 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 KIAA0895Q8NCT3 520 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 TMIEQ8NEW7 156 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 APOBEC4Q8WW27 367 aaKnown RBP6.38□□□□□ -1.39
VPS13B-211ENST00000522802 TMEM159Q96B96 161 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 DHX58Q96C10 678 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 EEF2KMTQ96G04 330 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 TBATAQ96M53 351 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 SERPINB11Q96P15 392 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 CATSPER2Q96P56 530 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 TUBGCP5Q96RT8 1024 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 NUDT22Q9BRQ3 303 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 FEM1AQ9BSK4 669 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 SLC13A1Q9BZW2 595 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 TMEM168Q9H0V1 697 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 KCTD10Q9H3F6 313 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 CASS4Q9NQ75 786 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 DYRK4Q9NR20 520 aa6.38□□□□□ -1.39
VPS13B-211ENST00000522802 CGNQ9P2M7 1197 aaKnown RBP6.38□□□□□ -1.39
VPS13B-211ENST00000522802 IL36AQ9UHA7 158 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms