RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 FZD3Q9NPG1 666 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 MBNL1Q9NR56 388 aaKnown RBP3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 DNAJB9Q9UBS3 223 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 GTF3C4Q9UKN8 822 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 PPIEQ9UNP9 301 aaKnown RBP3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 DCAF1Q9Y4B6 1507 aa3.42□□□□□ -1.86
HMGN1P28-201ENST00000521340 IGHV4-28A0A0C4DH34 117 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 KANSL1LA0AUZ9 987 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 A6NL46 340 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 PSMD14O00487 310 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 TO15178 435 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 RGS14O43566 566 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 GPC4O75487 556 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 MTA2O94776 668 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 CELF2O95319 508 aaKnown RBP3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 GH2P01242 217 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 CD58P19256 250 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 NMBRP28336 390 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 TNFRSF8P28908 595 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 KRT2P35908 639 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 CCR10P46092 362 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 MXI1P50539 228 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 LIMK1P53667 647 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 CSE1LP55060 971 aaKnown RBP3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 CLDN20P56880 219 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 PPP2R2BQ00005 443 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 TROAPQ12815 778 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 NEDD9Q14511 834 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 TRIP6Q15654 476 aaKnown RBP3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 KRTCAP3Q53RY4 240 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 ZRANB3Q5FWF4 1079 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 PAPPA-AS1Q5QFB9 102 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 STRIP1Q5VSL9 837 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 C18orf63Q68DL7 685 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 TMEM211Q6ICI0 200 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 BRAT1Q6PJG6 821 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 INTS8Q75QN2 995 aaKnown RBP3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 HAUS6Q7Z4H7 955 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 THNSL1Q8IYQ7 743 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 PCDH20Q8N6Y1 951 aaKnown RBP3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 OR5R1Q8NH85 324 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 KIF18AQ8NI77 898 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 OCC1Q8TAD7 63 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 GSDMBQ8TAX9 411 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 WFIKKN2Q8TEU8 576 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 NSMCE1Q8WV22 266 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 TEKT4Q8WW24 435 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 ERLEC1Q96DZ1 483 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 LRFN5Q96NI6 719 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 CAMK1GQ96NX5 476 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 C16orf70Q9BSU1 422 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 TMEM39BQ9GZU3 492 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 C2orf40Q9H1Z8 148 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 CNGB3Q9NQW8 809 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 ABCF3Q9NUQ8 709 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 CDC14AQ9UNH5 594 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 PCDHGA5Q9Y5G8 931 aa3.41□□□□□ -1.86
HMGN1P28-201ENST00000521340 EDDM13A0A1B0GTR0 161 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 FAM170AA1A519 330 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 MS4A18H0YCH9 400 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 KCNN4O15554 427 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 ZWINTO95229 277 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 TGDSO95455 350 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 EGFP01133 1207 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 CYP11B2P19099 503 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 ACHEP22303 614 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 HOXC13P31276 330 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 NPY4RP50391 375 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 ARSEP51690 589 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 CSNK2A1P68400 391 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 BNC1Q01954 994 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 CRYZQ08257 329 aaKnown RBP3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 C17orf67Q0P5P2 114 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 Q0VFX4 171 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 PNRC1Q12796 327 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 TRAF3Q13114 568 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 GPS2Q13227 327 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 TUBB2AQ13885 445 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 MELKQ14680 651 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 RBMS2Q15434 407 aaKnown RBP3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 VWC2Q2TAL6 325 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 LEXMQ3ZCV2 418 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 FAM98BQ52LJ0 330 aaKnown RBP3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 ZNF626Q68DY1 528 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 CAVIN1Q6NZI2 390 aaKnown RBP3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 DUS1LQ6P1R4 473 aaKnown RBP3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 ERN2Q76MJ5 926 aaKnown RBP3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 ZC3HC1Q86WB0 502 aaKnown RBP3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 PRAG1Q86YV5 1406 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 SRRM1Q8IYB3 904 aaKnown RBP3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 GCSAMQ8N6F7 178 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 ARFGAP1Q8N6T3 406 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 C7orf57Q8NEG2 295 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 ACVR1CQ8NER5 493 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 CSNK2A3Q8NEV1 391 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 TSPAN14Q8NG11 270 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 SPATA22Q8NHS9 363 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 BBS10Q8TAM1 723 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 HMGCLL1Q8TB92 370 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 DEPDC1BQ8WUY9 529 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms