RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 WDR83Q9BRX9 315 aaKnown RBP6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 TXLNGYQ9BZA5 131 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 MIR1-1HGQ9H1L0 117 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 VPS37BQ9H9H4 285 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 PPCSQ9HAB8 311 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 LRRC4CQ9HCJ2 640 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 SAYSD1Q9NPB0 183 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 RRAGDQ9NQL2 400 aaPredicted RBP6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 LATS2Q9NRM7 1088 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 CATSPERZQ9NTU4 200 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 PIH1D1Q9NWS0 290 aaKnown RBP6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 KLHL42Q9P2K6 505 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 SLC2A6Q9UGQ3 507 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 CRLS1Q9UJA2 301 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 TMPRSS11EQ9UL52 423 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 NFU1Q9UMS0 254 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 CHMP2BQ9UQN3 213 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 ANKRD6Q9Y2G4 727 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 PCDHB1Q9Y5F3 818 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 PCDHGB2Q9Y5G2 931 aa6.3□□□□□ -1.4
IGHV4-55-201ENST00000520889 ARHGEF17Q96PE2 2063 aaPredicted RBP6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 A0A1B0GTQ1 180 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 A0A1B0GVT2 93 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 TCRBV9S1A1TA0A576 114 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 PRSS38A1L453 326 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 FAM159BA6NKW6 160 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 GOLGA8CPA6NN73 597 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 H0Y8X5 98 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 PRMT5O14744 637 aaPredicted RBP6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 TPP1O14773 563 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 KPNA5O15131 536 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 KMOO15229 486 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 BUD23O43709 281 aaKnown RBP6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 DNAJC6O75061 913 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 CDK14O94921 469 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 TNFP01375 233 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 SLC4A1P02730 911 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 C1QAP02745 245 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 ESR1P03372 595 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 ATP1B2P14415 290 aaPredicted RBP6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 MSH3P20585 1137 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 POLD2P49005 469 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 CSNK1EP49674 416 aaKnown RBP6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 PRLHRP49683 370 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 HK3P52790 923 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 LIMK1P53667 647 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 TERF1P54274 439 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 PMS2P54278 862 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 CLDN2P57739 230 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 SRP54P61011 504 aaKnown RBP6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 HNRNPKP61978 463 aaKnown RBP eCLIP6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 TMPRSS15P98073 1019 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 PLOD1Q02809 727 aaPredicted RBP6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 PPARDQ03181 441 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 EIF2B5Q13144 721 aaKnown RBP6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 PTPRCAPQ14761 206 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 ELOCQ15369 112 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 ERCC6LQ2NKX8 1250 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 KIF19Q2TAC6 998 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 ZRANB3Q5FWF4 1079 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 GPRC6AQ5T6X5 926 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 ALS2CLQ60I27 953 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 DBX2Q6ZNG2 339 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 C3orf62Q6ZUJ4 267 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 MARK2Q7KZI7 788 aaKnown RBP6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 ARMCX6Q7L4S7 300 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 PTAR1Q7Z6K3 402 aaPredicted RBP6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 ADGRG6Q86SQ4 1221 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 KCNMB4Q86W47 210 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 SERPINA9Q86WD7 417 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 SPATS2Q86XZ4 545 aaKnown RBP6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 PELI3Q8N2H9 469 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 MREGQ8N565 214 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 DEFB119Q8N690 84 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 C2CD4AQ8NCU7 369 aaPredicted RBP6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 AENQ8WTP8 325 aaKnown RBP6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 CAVIN3Q969G5 261 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 DCUN1D1Q96GG9 259 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 PWWP2AQ96N64 755 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 PANX3Q96QZ0 392 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 CYTH2Q99418 400 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 ELF4Q99607 663 aaPredicted RBP6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 TIMM29Q9BSF4 260 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 TSSK1BQ9BXA7 367 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 LGR4Q9BXB1 951 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 PARD6BQ9BYG5 372 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 P2RY12Q9H244 342 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 ARRDC1-AS1Q9H2J1 176 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 CDC42EP4Q9H3Q1 356 aaKnown RBP6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 ACSS3Q9H6R3 686 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 SUDS3Q9H7L9 328 aaPredicted RBP6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 PLAC1Q9HBJ0 212 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 FZD3Q9NPG1 666 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 SEMA4GQ9NTN9 838 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 C20orf96Q9NUD7 363 aaPredicted RBP6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 DNAAF2Q9NVR5 837 aaKnown RBP6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 ATXN10Q9UBB4 475 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 NCDNQ9UBB6 729 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 SPASTQ9UBP0 616 aa6.29□□□□□ -1.4
IGHV4-55-201ENST00000520889 KLQ9UEF7 1012 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms