RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 IER5LQ5T953 404 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 PTCRAQ6ISU1 281 aaPredicted RBP9.88□□□□□ -0.83
SPARC-202ENST00000520687 FAM117BQ6P1L5 589 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 ZFP1Q6P2D0 407 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 LINGO4Q6UY18 593 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 BNC2Q6ZN30 1099 aaPredicted RBP9.88□□□□□ -0.83
SPARC-202ENST00000520687 LRRC74BQ6ZQY2 392 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 SPATA19Q7Z5L4 167 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 SNX20Q7Z614 316 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 ADAMTSL2Q86TH1 951 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 PIM3Q86V86 326 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 TMEM126BQ8IUX1 230 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 DSELQ8IZU8 1212 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 RBFAQ8N0V3 343 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 PCDH20Q8N6Y1 951 aaKnown RBP9.88□□□□□ -0.83
SPARC-202ENST00000520687 PHOSPHO2Q8TCD6 241 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 AGR3Q8TD06 166 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 DNAJC9Q8WXX5 260 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 OTUB2Q96DC9 234 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 NAF1Q96HR8 494 aaKnown RBP9.88□□□□□ -0.83
SPARC-202ENST00000520687 NSMCE3Q96MG7 304 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 ZNF641Q96N77 438 aaPredicted RBP9.88□□□□□ -0.83
SPARC-202ENST00000520687 CNTNAP3BQ96NU0 1288 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 SLC22A12Q96S37 553 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 CNTNAP3Q9BZ76 1288 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 CPEB1Q9BZB8 566 aaKnown RBP9.88□□□□□ -0.83
SPARC-202ENST00000520687 CLPBQ9H078 707 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 P2RY12Q9H244 342 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 ZFYVE1Q9HBF4 777 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 NUDT4Q9NZJ9 180 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 TBC1D14Q9P2M4 693 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 FKBPLQ9UIM3 349 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 GNPTGQ9UJJ9 305 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 FAM50BQ9Y247 325 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 HS3ST2Q9Y278 367 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 DHRS7Q9Y394 339 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 PPIL1Q9Y3C6 166 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 ACTL7AQ9Y615 435 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 COPG1Q9Y678 874 aaKnown RBP9.88□□□□□ -0.83
SPARC-202ENST00000520687 SLC4A7Q9Y6M7 1214 aa9.88□□□□□ -0.83
SPARC-202ENST00000520687 CAPN8A6NHC0 703 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 E5RI56 91 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 LEFTY2O00292 366 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 EIF3FO00303 357 aaPredicted RBP9.87□□□□□ -0.83
SPARC-202ENST00000520687 GIPC1O14908 333 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 GRM6O15303 877 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 SNX2O60749 519 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 SMNDC1O75940 238 aaKnown RBP eCLIP9.87□□□□□ -0.83
SPARC-202ENST00000520687 HNRNPA1P09651 372 aaKnown RBP eCLIP9.87□□□□□ -0.83
SPARC-202ENST00000520687 CHRM1P11229 460 aaPredicted RBP9.87□□□□□ -0.83
SPARC-202ENST00000520687 ANPEPP15144 967 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 IL9P15248 144 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 PTPN2P17706 415 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 KCNC1P48547 511 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 VASPP50552 380 aaPredicted RBP9.87□□□□□ -0.83
SPARC-202ENST00000520687 NUDT2P50583 147 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 PEX6Q13608 980 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 BLMHQ13867 455 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 PTPRCAPQ14761 206 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 GSTA3Q16772 222 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 PFKFB4Q16877 469 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 UGT3A2Q3SY77 523 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 COQ5Q5HYK3 327 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 CDKL4Q5MAI5 379 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 PPM1LQ5SGD2 360 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 KANK2Q63ZY3 851 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 ELMSAN1Q6PJG2 1045 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 LARP4Q71RC2 724 aaKnown RBP eCLIP9.87□□□□□ -0.832e-6■■□□□ 12
SPARC-202ENST00000520687 TAS2R42Q7RTR8 314 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 GPSM1Q86YR5 675 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 RYBPQ8N488 228 aaPredicted RBP9.87□□□□□ -0.83
SPARC-202ENST00000520687 OR2AP1Q8NGE2 309 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 OR56A4Q8NGH8 313 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 RIN3Q8TB24 985 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 DTX3LQ8TDB6 740 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 AUTS2Q8WXX7 1259 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 DLG3Q92796 817 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 FUBP1Q96AE4 644 aaKnown RBP9.87□□□□□ -0.83
SPARC-202ENST00000520687 C19orf60Q96EN9 201 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 CATSPER2Q96P56 530 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 RAD9AQ99638 391 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 GPR21Q99679 349 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 SLC2A11Q9BYW1 496 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 S100A14Q9HCY8 104 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 LATS2Q9NRM7 1088 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 RAD18Q9NS91 495 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 LMCD1Q9NZU5 365 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 SARDHQ9UL12 918 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 POMPQ9Y244 141 aa9.87□□□□□ -0.83
SPARC-202ENST00000520687 FCF1Q9Y324 198 aaKnown RBP9.87□□□□□ -0.83
SPARC-202ENST00000520687 MIA3Q5JRA6 1907 aa9.86□□□□□ -0.83
SPARC-202ENST00000520687 TRBV5-4A0A0C4DH59 114 aa9.86□□□□□ -0.83
SPARC-202ENST00000520687 GRXCR2A6NFK2 248 aa9.86□□□□□ -0.83
SPARC-202ENST00000520687 SUPT3HB4E1H0 165 aa9.86□□□□□ -0.83
SPARC-202ENST00000520687 H0Y3Z8 333 aa9.86□□□□□ -0.83
SPARC-202ENST00000520687 AIM2O14862 343 aa9.86□□□□□ -0.83
SPARC-202ENST00000520687 CLASP2O75122 1294 aaKnown RBP9.86□□□□□ -0.83
SPARC-202ENST00000520687 TBX10O75333 385 aa9.86□□□□□ -0.83
SPARC-202ENST00000520687 SUPT3HO75486 399 aa9.86□□□□□ -0.83
SPARC-202ENST00000520687 ECI2O75521 394 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms