RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 CLDN20P56880 219 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 NLRP5P59047 1200 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 EEF1A1P68104 462 aaKnown RBP3.61□□□□□ -1.83
VPS13B-207ENST00000518569 MRPS5P82675 430 aaKnown RBP3.61□□□□□ -1.83
VPS13B-207ENST00000518569 SLC20A2Q08357 652 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 COASYQ13057 564 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 ZBTB17Q13105 803 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 CHAF1BQ13112 559 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 WTAPQ15007 396 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 KRTCAP3Q53RY4 240 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 EEF1A1P5Q5VTE0 462 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 GFRALQ6UXV0 394 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.61□□□□□ -1.83
VPS13B-207ENST00000518569 ZNF704Q6ZNC4 412 aaPredicted RBP3.61□□□□□ -1.83
VPS13B-207ENST00000518569 TPRG1Q6ZUI0 275 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 TUBA1AQ71U36 451 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 SZRD1Q7Z422 152 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 SFR1Q86XK3 245 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 TMEM219Q86XT9 240 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 KMT5CQ86Y97 462 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 ARID3BQ8IVW6 561 aaPredicted RBP3.61□□□□□ -1.83
VPS13B-207ENST00000518569 NAGSQ8N159 534 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 OR5R1Q8NH85 324 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 SLC20A1Q8WUM9 679 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 LRRC59Q96AG4 307 aaKnown RBP3.61□□□□□ -1.83
VPS13B-207ENST00000518569 IL17FQ96PD4 163 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 TUBA1CQ9BQE3 449 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 MAK16Q9BXY0 300 aaKnown RBP3.61□□□□□ -1.83
VPS13B-207ENST00000518569 KLHL1Q9NR64 748 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 MALT1Q9UDY8 824 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 DBNLQ9UJU6 430 aaKnown RBP3.61□□□□□ -1.83
VPS13B-207ENST00000518569 PADI3Q9ULW8 664 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 KLHL20Q9Y2M5 609 aa3.61□□□□□ -1.83
VPS13B-207ENST00000518569 A0A1W2PP11 408 aa3.6□□□□□ -1.83
VPS13B-207ENST00000518569 SMTNL1A8MU46 457 aa3.6□□□□□ -1.83
VPS13B-207ENST00000518569 CLGNO14967 610 aa3.6□□□□□ -1.83
VPS13B-207ENST00000518569 MITFO75030 526 aaPredicted RBP3.6□□□□□ -1.83
VPS13B-207ENST00000518569 GFPT2O94808 682 aa3.6□□□□□ -1.83
VPS13B-207ENST00000518569 AFPP02771 609 aaKnown RBP3.6□□□□□ -1.83
VPS13B-207ENST00000518569 PORP16435 677 aaPredicted RBP3.6□□□□□ -1.83
VPS13B-207ENST00000518569 MMP14P50281 582 aa3.6□□□□□ -1.83
VPS13B-207ENST00000518569 RELQ04864 619 aaPredicted RBP3.6□□□□□ -1.83
VPS13B-207ENST00000518569 EEF1A2Q05639 463 aaKnown RBP3.6□□□□□ -1.83
VPS13B-207ENST00000518569 ILF3Q12906 894 aaKnown RBP eCLIP3.6□□□□□ -1.83
VPS13B-207ENST00000518569 CDC16Q13042 620 aa3.6□□□□□ -1.83
VPS13B-207ENST00000518569 ZNF234Q14588 700 aa3.6□□□□□ -1.83
VPS13B-207ENST00000518569 MVPQ14764 893 aaKnown RBP3.6□□□□□ -1.83
VPS13B-207ENST00000518569 SYT16Q17RD7 645 aa3.6□□□□□ -1.83
VPS13B-207ENST00000518569 RILPL1Q5EBL4 403 aa3.6□□□□□ -1.83
VPS13B-207ENST00000518569 CCDC190Q86UF4 302 aa3.6□□□□□ -1.83
VPS13B-207ENST00000518569 EXOC3L1Q86VI1 746 aa3.6□□□□□ -1.83
VPS13B-207ENST00000518569 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.6□□□□□ -1.83
VPS13B-207ENST00000518569 NME8Q8N427 588 aa3.6□□□□□ -1.83
VPS13B-207ENST00000518569 GCSAMQ8N6F7 178 aa3.6□□□□□ -1.83
VPS13B-207ENST00000518569 EMC1Q8N766 993 aa3.6□□□□□ -1.83
VPS13B-207ENST00000518569 ZNF441Q8N8Z8 693 aa3.6□□□□□ -1.83
VPS13B-207ENST00000518569 DUSP19Q8WTR2 217 aa3.6□□□□□ -1.83
VPS13B-207ENST00000518569 SORCS1Q8WY21 1168 aa3.6□□□□□ -1.83
VPS13B-207ENST00000518569 RSRC1Q96IZ7 334 aaKnown RBP3.6□□□□□ -1.83
VPS13B-207ENST00000518569 FEM1CQ96JP0 617 aa3.6□□□□□ -1.83
VPS13B-207ENST00000518569 CTAGE1Q96RT6 745 aa3.6□□□□□ -1.83
VPS13B-207ENST00000518569 FKRPQ9H9S5 495 aa3.6□□□□□ -1.83
VPS13B-207ENST00000518569 SEC63Q9UGP8 760 aaKnown RBP3.6□□□□□ -1.83
VPS13B-207ENST00000518569 A0A1W2PR77 199 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 hCG_1807616A0A1W2PRN6 198 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 A0A1W2PS18 150 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 TMEM8BA6NDV4 472 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 PRSS47A8MTI9 375 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 H3BQ06 376 aaPredicted RBP3.59□□□□□ -1.83
VPS13B-207ENST00000518569 TULP2O00295 520 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 BUD23O43709 281 aaKnown RBP3.59□□□□□ -1.83
VPS13B-207ENST00000518569 GH2P01242 217 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 HLA-DOBP13765 273 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 MYOD1P15172 320 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 ZNF23P17027 643 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 GNL1P36915 607 aaPredicted RBP3.59□□□□□ -1.83
VPS13B-207ENST00000518569 IL15P40933 162 aaPredicted RBP3.59□□□□□ -1.83
VPS13B-207ENST00000518569 CTSCP53634 463 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 GAS1P54826 345 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 RRP1P56182 461 aaKnown RBP3.59□□□□□ -1.83
VPS13B-207ENST00000518569 SPOCK1Q08629 439 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 TROAPQ12815 778 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 GTF2H2Q13888 395 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 GLIPR1L2Q4G1C9 344 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 TMEM35AQ53FP2 167 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 FAM109BQ6ICB4 259 aaPredicted RBP3.59□□□□□ -1.83
VPS13B-207ENST00000518569 WBP2NLQ6ICG8 309 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 GTF2H2CQ6P1K8 395 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 CLEC4GQ6UXB4 293 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 C18orf65Q6ZTR6 163 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 ASB18Q6ZVZ8 466 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 MAP7D3Q8IWC1 876 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 ODF3L1Q8IXM7 274 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 PM20D2Q8IYS1 436 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 FAM9BQ8IZU0 186 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 MUC20Q8N307 709 aaPredicted RBP3.59□□□□□ -1.83
VPS13B-207ENST00000518569 ACVR1CQ8NER5 493 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 HMGCLL1Q8TB92 370 aa3.59□□□□□ -1.83
VPS13B-207ENST00000518569 UTP15Q8TED0 518 aaKnown RBP3.59□□□□□ -1.83
VPS13B-207ENST00000518569 SAT2Q96F10 170 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms