RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 HLCSP50747 726 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 GRSF1Q12849 480 aaKnown RBP eCLIP6.61□□□□□ -1.35
CDH12-203ENST00000517378 GALNT3Q14435 633 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 ZNF235Q14590 738 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 TAF1AQ15573 450 aaPredicted RBP6.61□□□□□ -1.35
CDH12-203ENST00000517378 TSNQ15631 228 aaKnown RBP6.61□□□□□ -1.35
CDH12-203ENST00000517378 RABL3Q5HYI8 236 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 PAGE3Q5JUK9 113 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 FAM26DQ5JW98 314 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 PAQR3Q6TCH7 311 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 ZFAND4Q86XD8 727 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 SCN4BQ8IWT1 228 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 PDPRQ8NCN5 879 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 TRPV1Q8NER1 839 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 OR2T11Q8NH01 316 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 ZNF382Q96SR6 550 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 LRRC3Q9BY71 257 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 PLGRKTQ9HBL7 147 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 ZFYVE28Q9HCC9 887 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 ABI2Q9NYB9 513 aaPredicted RBP6.61□□□□□ -1.35
CDH12-203ENST00000517378 MAGEL2Q9UJ55 1249 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 VPS9D1Q9Y2B5 631 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 PCDHB3Q9Y5E6 796 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 ZNF106Q9H2Y7 1883 aaKnown RBP6.61□□□□□ -1.35
CDH12-203ENST00000517378 RNF103-CHMP3A0A140T963 221 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 SH3PXD2BA1X283 911 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 CCDC154A6NI56 674 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 H3BMQ9 156 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 ARNTLO00327 626 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 IFRD1O00458 451 aaPredicted RBP6.61□□□□□ -1.35
CDH12-203ENST00000517378 E2F3O00716 465 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 INPP4BO15327 924 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 CLOCKO15516 846 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 B4GALT3O60512 393 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 TULP3O75386 442 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 SOAT2O75908 522 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 RHOBTB1O94844 696 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 C1RP00736 705 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 LDLRP01130 860 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 MTHFD1P11586 935 aaKnown RBP6.61□□□□□ -1.35
CDH12-203ENST00000517378 CDH1P12830 882 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 JUNBP17275 347 aaPredicted RBP6.61□□□□□ -1.35
CDH12-203ENST00000517378 RPL10P27635 214 aaKnown RBP6.61□□□□□ -1.35
CDH12-203ENST00000517378 OR1E1P30953 314 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 ETFBP38117 255 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 GPR15P49685 360 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 APLP1P51693 650 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 POLR2JP52435 117 aaKnown RBP6.61□□□□□ -1.35
CDH12-203ENST00000517378 EFEMP1Q12805 493 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 PTPRCAPQ14761 206 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 RPS6KA2Q15349 733 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 RAP1GAP2Q684P5 730 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 NADSYN1Q6IA69 706 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 KLHL35Q6PF15 583 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 CLVS1Q8IUQ0 354 aaPredicted RBP6.61□□□□□ -1.35
CDH12-203ENST00000517378 HID1Q8IV36 788 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 RYBPQ8N488 228 aaPredicted RBP6.61□□□□□ -1.35
CDH12-203ENST00000517378 DHRSXQ8N5I4 330 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 FBXL20Q96IG2 436 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 COG8Q96MW5 612 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 CCDC115Q96NT0 180 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 ADAM2Q99965 735 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 RPF2Q9H7B2 306 aaKnown RBP6.61□□□□□ -1.35
CDH12-203ENST00000517378 ZNF408Q9H9D4 720 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 LIN28AQ9H9Z2 209 aaKnown RBP6.61□□□□□ -1.35
CDH12-203ENST00000517378 SEMA4BQ9NPR2 832 aaPredicted RBP6.61□□□□□ -1.35
CDH12-203ENST00000517378 RIC8BQ9NVN3 520 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 COMMD8Q9NX08 183 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 ARIH1Q9Y4X5 557 aaPredicted RBP6.61□□□□□ -1.35
CDH12-203ENST00000517378 NEUROG3Q9Y4Z2 214 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 FADS3Q9Y5Q0 445 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 COMMD10Q9Y6G5 202 aa6.61□□□□□ -1.35
CDH12-203ENST00000517378 CROCCQ5TZA2 2017 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 NPEPPSL1A6NEC2 478 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 C9JVG2 144 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 H0Y858 1186 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 CDC7O00311 574 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 UPK1AO00322 258 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 SNX2O60749 519 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 HPRP00739 348 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 INHBBP09529 407 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 CYBAP13498 195 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 CR2P20023 1033 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 IL12AP29459 219 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 CLCN4P51793 760 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 RAB15P59190 212 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 RAB39AQ14964 217 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 DDR2Q16832 855 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 GNASQ5JWF2 1037 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 CCNYL2Q5T2Q4 361 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 NANOGP8Q6NSW7 305 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 ELMSAN1Q6PJG2 1045 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 CXCL17Q6UXB2 119 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 Q6ZNX1 250 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 RNF165Q6ZSG1 346 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 GPRIN3Q6ZVF9 776 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 FKBP9P1Q75LS8 142 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 GALNT13Q8IUC8 556 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 OR56A4Q8NGH8 313 aa6.6□□□□□ -1.35
CDH12-203ENST00000517378 PROKR1Q8TCW9 393 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms