RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 OXNAD1Q96HP4 312 aaPredicted RBP1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 PCYT2Q99447 389 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 KCNN2Q9H2S1 579 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 NOD2Q9HC29 1040 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 TRPC7Q9HCX4 862 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 DDX4Q9NQI0 724 aaKnown RBP1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 ZNF71Q9NQZ8 489 aaPredicted RBP1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 SNTG1Q9NSN8 517 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 COQ3Q9NZJ6 369 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 KIAA1456Q9P272 454 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 CHPF2Q9P2E5 772 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 THEGQ9P2T0 379 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 PEMTQ9UBM1 199 aa1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 EXO1Q9UQ84 846 aaKnown RBP1.3□□□□□ -2.2
RNU6-561P-201ENST00000516222 TMEM129A0AVI4 362 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 KCNN4O15554 427 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 CSPG5O95196 566 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 KRT19P08727 400 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 ICA1Q05084 483 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 GRIK3Q13003 919 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 MAD2L1Q13257 205 aaPredicted RBP1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 DECR1Q16698 335 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 C2orf68Q2NKX9 166 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 HLA-BQ31612 363 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 C15orf32Q32M92 178 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 OLFML2AQ68BL7 652 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 SEL1L3Q68CR1 1132 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 FBXO46Q6PJ61 603 aaPredicted RBP1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 SRLQ86TD4 932 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 SLC35F3Q8IY50 421 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 GPD1LQ8N335 351 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 PARP8Q8N3A8 854 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 TNIP2Q8NFZ5 429 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 SPPL3Q8TCT6 385 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 GTF3AQ92664 365 aaKnown RBP1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 SGCZQ96LD1 299 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 ZSCAN31Q96LW9 406 aaPredicted RBP1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 HARBI1Q96MB7 349 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 GAL3ST4Q96RP7 486 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 USP28Q96RU2 1077 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 FAM110AQ9BQ89 295 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 H2AFJQ9BTM1 129 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 PUS3Q9BZE2 481 aaKnown RBP1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 LAT2Q9GZY6 243 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 USP44Q9H0E7 712 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 NUDT4Q9NZJ9 180 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 TMEM181Q9P2C4 612 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 CTNNAL1Q9UBT7 734 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 EPHA6Q9UF33 1036 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 MUTYHQ9UIF7 546 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 CDC23Q9UJX2 597 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 RRP7AQ9Y3A4 280 aaKnown RBP1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 UTYO14607 1347 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 ASTN2O75129 1339 aaPredicted RBP1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 KIAA1210Q9ULL0 1709 aa1.29□□□□□ -2.2
RNU6-561P-201ENST00000516222 SMCHD1A6NHR9 2005 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 STX16-NPEPL1H3BU86 382 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 PEX12O00623 359 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 STX16O14662 325 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 NADKO95544 446 aaPredicted RBP1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 DUS4LO95620 317 aaKnown RBP1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 TFP02787 698 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 EPHA2P29317 976 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 SHMT1P34896 483 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 GABRB2P47870 512 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 SP3Q02447 781 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 ANKRD1Q15327 319 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 ZNF766Q5HY98 468 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 RSBN1Q5VWQ0 802 aaPredicted RBP1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 PSRC1Q6PGN9 363 aaPredicted RBP1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 PLXDC2Q6UX71 529 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 ADGRG6Q86SQ4 1221 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 KRTAP11-1Q8IUC1 163 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 ZBED8Q8IZ13 594 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 POM121L12Q8N7R1 296 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 HMGCLL1Q8TB92 370 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 SLC41A2Q96JW4 573 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 PRAC1Q96KF2 57 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 CNOT6LQ96LI5 555 aaKnown RBP1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 RMDN3Q96TC7 470 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 KRT12Q99456 494 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 RTN4RQ9BZR6 473 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 WWTR1Q9GZV5 400 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 LMAN2LQ9H0V9 348 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 SIL1Q9H173 461 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 STN1Q9H668 368 aaKnown RBP1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 KAT14Q9H8E8 782 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 PTTG2Q9NZH5 202 aa1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 LAS1LQ9Y4W2 734 aaKnown RBP1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 TDRD15B5MCY1 1934 aaKnown RBP1.28□□□□□ -2.2
RNU6-561P-201ENST00000516222 CROCCQ5TZA2 2017 aa1.27□□□□□ -2.21
RNU6-561P-201ENST00000516222 COL16A1Q07092 1604 aaPredicted RBP1.27□□□□□ -2.21
RNU6-561P-201ENST00000516222 PRAG1Q86YV5 1406 aa1.27□□□□□ -2.21
RNU6-561P-201ENST00000516222 IFNL4K9M1U5 179 aa1.27□□□□□ -2.21
RNU6-561P-201ENST00000516222 PLK4O00444 970 aa1.27□□□□□ -2.21
RNU6-561P-201ENST00000516222 ACKR2O00590 384 aa1.27□□□□□ -2.21
RNU6-561P-201ENST00000516222 PHOX2AO14813 284 aa1.27□□□□□ -2.21
RNU6-561P-201ENST00000516222 ANKRD28O15084 1053 aa1.27□□□□□ -2.21
RNU6-561P-201ENST00000516222 SEC14L5O43304 696 aa1.27□□□□□ -2.21
RNU6-561P-201ENST00000516222 GPR137BO60478 399 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms