RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 TMEM9Q9P0T7 183 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 VPS28Q9UK41 221 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 ARFGEF1Q9Y6D6 1849 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 COQ9O75208 318 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 GSRP00390 522 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 CD247P20963 164 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 KCNA5P22460 613 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 FMO3P31513 532 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 COPZ1P61923 177 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 FAM45BPQ6NSW5 357 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 P2RY8Q86VZ1 359 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 LRRC52Q8N7C0 313 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 LEMD2Q8NC56 503 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 CLHC1Q8NHS4 586 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 FAM45AQ8TCE6 357 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 BIRC7Q96CA5 298 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 DEPDC7Q96QD5 511 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 RBM38Q9H0Z9 239 aaKnown RBP13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 EPS8L2Q9H6S3 715 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 FAM105AQ9NUU6 356 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 EVPLLA8MZ36 301 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 PFKMP08237 780 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 BMP2P12643 396 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 PROZP22891 400 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 GGT5P36269 586 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 IST1P53990 364 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 TMEM236Q5W0B7 351 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 UTP15Q8TED0 518 aaKnown RBP13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 PROX1Q92786 737 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 ACTR8Q9H981 624 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 INTS10Q9NVR2 710 aaKnown RBP13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 UXTQ9UBK9 157 aaPredicted RBP13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 MAGEL2Q9UJ55 1249 aa13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 GOLGA4Q13439 2230 aaKnown RBP13.51□□□□□ -0.25
SH3TC1-225ENST00000515682 KRBA1A5PL33 1030 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 CCNKO75909 580 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 RECQL5O94762 991 aaPredicted RBP13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 C22orf31O95567 290 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 CYBBP04839 570 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 ATP6V0D1P61421 351 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 RPL38P63173 70 aaKnown RBP13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 CLCQ05315 142 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 MAPKAPK3Q16644 382 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 SPANXN2Q5MJ10 180 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 ARMC4Q5T2S8 1044 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 PTRHD1Q6GMV3 140 aaKnown RBP13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 THOC7Q6I9Y2 204 aaKnown RBP13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 SIX5Q8N196 739 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 SVOPQ8N4V2 548 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 SETD9Q8NE22 299 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 TBC1D15Q8TC07 691 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 FAM110BQ8TC76 370 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 IMPAD1Q9NX62 359 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 POLR3HQ9Y535 204 aaPredicted RBP13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 COL2A1P02458 1487 aaPredicted RBP13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 OXSR1O95747 527 aaPredicted RBP13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 VBP1P61758 197 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 TRUB1Q8WWH5 349 aaKnown RBP13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 FBXO32Q969P5 355 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 MTFMTQ96DP5 389 aaKnown RBP13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 SLC47A1Q96FL8 570 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 FEM1CQ96JP0 617 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 NSUN5Q96P11 429 aaKnown RBP13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 TOR3AQ9H497 397 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 WWOXQ9NZC7 414 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 BCKDKO14874 412 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 XPNPEP2O43895 674 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 VPS4BO75351 444 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 MSH3P20585 1137 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 IMPDH1P20839 514 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 EPS8Q12929 822 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 LRP8Q14114 963 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 GALNT3Q14435 633 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 CACHD1Q5VU97 1274 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 CYP4V2Q6ZWL3 525 aaPredicted RBP13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 LYSMD3Q7Z3D4 306 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 OR10A6Q8NH74 314 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 LHPPQ9H008 270 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 TRMT13Q9NUP7 481 aaKnown RBP13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 SPATA7Q9P0W8 599 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 TBC1D30Q9Y2I9 924 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 SLC27A5Q9Y2P5 690 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 TMED5Q9Y3A6 229 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 MYO9BQ13459 2157 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 TFECO14948 347 aaPredicted RBP13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 ARHGEF9O43307 516 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 ABCB7O75027 752 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 SEC22BO75396 215 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 IQCF3P0C7M6 154 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 IL12AP29459 219 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 IDH2P48735 452 aaKnown RBP13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 UFM1P61960 85 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 TWF1Q12792 350 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 TOP3AQ13472 1001 aaPredicted RBP13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 BTG3Q14201 252 aaPredicted RBP13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 LAPTM4AQ15012 233 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 SYT16Q17RD7 645 aa13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 RNF219Q5W0B1 726 aaPredicted RBP13.5□□□□□ -0.25
SH3TC1-225ENST00000515682 ANKRD26P1Q6NSI1 321 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms