RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 KCNJ13O60928 360 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 CDK14O94921 469 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 METTL18O95568 372 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 ECEL1O95672 775 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 RPLP0P05388 317 aaKnown RBP12.62□□□□□ -0.39
CLCN3-210ENST00000515420 MLLT3P42568 568 aaPredicted RBP12.62□□□□□ -0.39
CLCN3-210ENST00000515420 ZNF140P52738 457 aaPredicted RBP12.62□□□□□ -0.39
CLCN3-210ENST00000515420 PDX1P52945 283 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 MAZP56270 477 aaKnown RBP12.62□□□□□ -0.39
CLCN3-210ENST00000515420 CYP4F3Q08477 520 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 EIF3IQ13347 325 aaKnown RBP12.62□□□□□ -0.39
CLCN3-210ENST00000515420 OLIG2Q13516 323 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 GTF2H3Q13889 308 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 CHRNA6Q15825 494 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 FAM151BQ6UXP7 276 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 C4orf22Q6V702 233 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 LIN37Q96GY3 246 aaPredicted RBP12.62□□□□□ -0.39
CLCN3-210ENST00000515420 PDLIM2Q96JY6 352 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 ZNF514Q96K75 400 aaPredicted RBP12.62□□□□□ -0.39
CLCN3-210ENST00000515420 TTC25Q96NG3 672 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 TMEM74Q96NL1 305 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 APOL2Q9BQE5 337 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 POLR1BQ9H9Y6 1135 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 TMPRSS11EQ9UL52 423 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 ZNF148Q9UQR1 794 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 PLEKHM1Q9Y4G2 1056 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 PCDHB1Q9Y5F3 818 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 PCYT1BQ9Y5K3 369 aaPredicted RBP12.62□□□□□ -0.39
CLCN3-210ENST00000515420 ENTPD2Q9Y5L3 495 aa12.62□□□□□ -0.39
CLCN3-210ENST00000515420 ZZEF1O43149 2961 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 KIR2DS5A0A0G2JLQ3 304 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 A0A0G2JNG1 304 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 KLHL33A6NCF5 533 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 PRR19A6NJB7 356 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 SRRM3A6NNA2 597 aaPredicted RBP12.61□□□□□ -0.39
CLCN3-210ENST00000515420 AGAP14A8MT82 685 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 H7C0S8 307 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 KIR2DS3K7RE56 304 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 USP12O75317 370 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 SUN1O94901 812 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 PRAMEF1O95521 474 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 FGGP02679 453 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 ACP5P13686 325 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 F3P13726 295 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 ZNF7P17097 686 aaPredicted RBP12.61□□□□□ -0.39
CLCN3-210ENST00000515420 VCLP18206 1134 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 MSNP26038 577 aaKnown RBP12.61□□□□□ -0.39
CLCN3-210ENST00000515420 CCKBRP32239 447 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 LSSP48449 732 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 CCL7P80098 99 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 B4GALNT1Q00973 533 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 TMEM115Q12893 351 aaPredicted RBP12.61□□□□□ -0.39
CLCN3-210ENST00000515420 NFATC2Q13469 925 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 SQSTM1Q13501 440 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 SEMA5AQ13591 1074 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 KIR2DS5Q14953 304 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 IYDQ6PHW0 289 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 WASH2PQ6VEQ5 465 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 SFTPA2Q8IWL1 248 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 CCDC89Q8N998 374 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 OR4K2Q8NGD2 314 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 GDAP1Q8TB36 358 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 ZNF398Q8TD17 642 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 C1orf54Q8WWF1 131 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 ULK4Q96C45 1275 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 DPYSL5Q9BPU6 564 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 STN1Q9H668 368 aaKnown RBP12.61□□□□□ -0.39
CLCN3-210ENST00000515420 SARS2Q9NP81 518 aaKnown RBP12.61□□□□□ -0.39
CLCN3-210ENST00000515420 WASH6PQ9NQA3 447 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 PAK5Q9P286 719 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 KCNK6Q9Y257 313 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 PRKAB1Q9Y478 270 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 PCDHGA8Q9Y5G5 932 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 DNMT3AQ9Y6K1 912 aaPredicted RBP12.61□□□□□ -0.39
CLCN3-210ENST00000515420 AK5Q9Y6K8 562 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 KIF26BQ2KJY2 2108 aa12.61□□□□□ -0.39
CLCN3-210ENST00000515420 CCDC187A0A096LP49 1063 aa12.6□□□□□ -0.39
CLCN3-210ENST00000515420 TAF4O00268 1085 aa12.6□□□□□ -0.39
CLCN3-210ENST00000515420 LDB2O43679 373 aa12.6□□□□□ -0.39
CLCN3-210ENST00000515420 BUD23O43709 281 aaKnown RBP12.6□□□□□ -0.39
CLCN3-210ENST00000515420 CEP104O60308 925 aa12.6□□□□□ -0.39
CLCN3-210ENST00000515420 SRP72O76094 671 aaKnown RBP12.6□□□□□ -0.39
CLCN3-210ENST00000515420 CPNE6O95741 557 aa12.6□□□□□ -0.39
CLCN3-210ENST00000515420 IFNB1P01574 187 aa12.6□□□□□ -0.39
CLCN3-210ENST00000515420 PSMA3P25788 255 aa12.6□□□□□ -0.39
CLCN3-210ENST00000515420 ERVPABLB-1P60509 514 aa12.6□□□□□ -0.39
CLCN3-210ENST00000515420 GPLD1P80108 840 aa12.6□□□□□ -0.39
CLCN3-210ENST00000515420 XIAPP98170 497 aa12.6□□□□□ -0.39
CLCN3-210ENST00000515420 DMPKQ09013 629 aa12.6□□□□□ -0.39
CLCN3-210ENST00000515420 CDH17Q12864 832 aa12.6□□□□□ -0.39
CLCN3-210ENST00000515420 BIRC2Q13490 618 aa12.6□□□□□ -0.39
CLCN3-210ENST00000515420 LAMB3Q13751 1172 aa12.6□□□□□ -0.39
CLCN3-210ENST00000515420 SPARCL1Q14515 664 aa12.6□□□□□ -0.39
CLCN3-210ENST00000515420 INSCQ1MX18 579 aa12.6□□□□□ -0.39
CLCN3-210ENST00000515420 GPR33Q49SQ1 333 aa12.6□□□□□ -0.39
CLCN3-210ENST00000515420 KHDC1Q4VXA5 237 aaKnown RBP12.6□□□□□ -0.39
CLCN3-210ENST00000515420 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.6□□□□□ -0.39
CLCN3-210ENST00000515420 GPRC6AQ5T6X5 926 aa12.6□□□□□ -0.39
CLCN3-210ENST00000515420 C11orf96Q7Z7L8 435 aa12.6□□□□□ -0.39
CLCN3-210ENST00000515420 SLC9B2Q86UD5 537 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms