RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 GNPDA1P46926 289 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 CTSCP53634 463 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 GPX6P59796 221 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 SRP54P61011 504 aaKnown RBP11.21□□□□□ -0.61
HTT-213ENST00000513806 YPEL5P62699 121 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 VSNL1P62760 191 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 MPP1Q00013 466 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 CAV1Q03135 178 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 CACNG1Q06432 222 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 CTBP1Q13363 440 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 ITGA9Q13797 1035 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 HSP90AA5PQ58FG0 334 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 ZNF789Q5FWF6 425 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 KIAA0930Q6ICG6 404 aaPredicted RBP11.21□□□□□ -0.61
HTT-213ENST00000513806 PRR23CQ6ZRP0 262 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 NLRP9Q7RTR0 991 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 TMEM135Q86UB9 458 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 IQCHQ86VS3 1027 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 GATAD2AQ86YP4 633 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 PHYKPLQ8IUZ5 450 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 DENND6AQ8IWF6 608 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 IFT20Q8IY31 132 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 PHACTR4Q8IZ21 702 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 NXPE1Q8N323 547 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 MINDY1Q8N5J2 469 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 BEND7Q8N7W2 519 aaPredicted RBP11.21□□□□□ -0.61
HTT-213ENST00000513806 RASGEF1AQ8N9B8 481 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.21□□□□□ -0.61
HTT-213ENST00000513806 OR56A4Q8NGH8 313 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 CEP76Q8TAP6 659 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 RUBCNQ92622 972 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 VPS35Q96QK1 796 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 CARS2Q9HA77 564 aaKnown RBP11.21□□□□□ -0.61
HTT-213ENST00000513806 SMYD2Q9NRG4 433 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 C20orf96Q9NUD7 363 aaPredicted RBP11.21□□□□□ -0.61
HTT-213ENST00000513806 UCKL1Q9NWZ5 548 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 KCTD5Q9NXV2 234 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 FAM8A1Q9UBU6 413 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 RIMKLBQ9ULI2 386 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 ST14Q9Y5Y6 855 aa11.21□□□□□ -0.61
HTT-213ENST00000513806 FAM186AA6NE01 2351 aa11.21□□□□□ -0.62
HTT-213ENST00000513806 ZNF292O60281 2723 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 TRBV5-4A0A0C4DH59 114 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 GFRA3O60609 400 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 DNAJC6O75061 913 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 POLBP06746 335 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 ITGB6P18564 788 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 ACRV1P26436 265 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 AK4P27144 223 aaPredicted RBP11.2□□□□□ -0.62
HTT-213ENST00000513806 TEAD1P28347 426 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 HOXD12P35452 270 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 TMEM115Q12893 351 aaPredicted RBP11.2□□□□□ -0.62
HTT-213ENST00000513806 LAMB3Q13751 1172 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 EFTUD2Q15029 972 aaKnown RBP eCLIP11.2□□□□□ -0.622e-6■■□□□ 13.2
HTT-213ENST00000513806 CSRP2Q16527 193 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 KYNUQ16719 465 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 LONRF1Q17RB8 773 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 ZNF423Q2M1K9 1284 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 UAP1L1Q3KQV9 507 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 AASDHQ4L235 1098 aaPredicted RBP11.2□□□□□ -0.62
HTT-213ENST00000513806 FASTKD1Q53R41 847 aaKnown RBP11.2□□□□□ -0.62
HTT-213ENST00000513806 SPANXN3Q5MJ09 141 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 ZDHHC20Q5W0Z9 365 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 STEAP4Q687X5 459 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 NAPRTQ6XQN6 538 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 KCNMB4Q86W47 210 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 PARGQ86W56 976 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 SFTPA2Q8IWL1 248 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 RAVER1Q8IY67 606 aaKnown RBP11.2□□□□□ -0.62
HTT-213ENST00000513806 KIAA2013Q8IYS2 634 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 CLDN19Q8N6F1 224 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 UHMK1Q8TAS1 419 aaKnown RBP11.2□□□□□ -0.62
HTT-213ENST00000513806 PYROXD1Q8WU10 500 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 SGF29Q96ES7 293 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 FMO2Q99518 471 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 EDEM2Q9BV94 578 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 TMEM168Q9H0V1 697 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 CDH19Q9H159 772 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 TRIM39Q9HCM9 518 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 PPANQ9NQ55 473 aaKnown RBP11.2□□□□□ -0.62
HTT-213ENST00000513806 FBXO6Q9NRD1 293 aaPredicted RBP11.2□□□□□ -0.62
HTT-213ENST00000513806 NINJ2Q9NZG7 142 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 ZNHIT2Q9UHR6 403 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 SLC17A4Q9Y2C5 497 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 GPSM3Q9Y4H4 160 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 FAM169AQ9Y6X4 670 aa11.2□□□□□ -0.62
HTT-213ENST00000513806 GOLGA4Q13439 2230 aaKnown RBP11.19□□□□□ -0.62
HTT-213ENST00000513806 MAGEB16A2A368 324 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 AGAP14A8MT82 685 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 CXorf49A8MYA2 514 aaPredicted RBP11.19□□□□□ -0.62
HTT-213ENST00000513806 CDX4O14627 284 aaPredicted RBP11.19□□□□□ -0.62
HTT-213ENST00000513806 NDC80O14777 642 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 SGTAO43765 313 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 CDK14O94921 469 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 PYGLP06737 847 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 HOXC4P09017 264 aaPredicted RBP11.19□□□□□ -0.62
HTT-213ENST00000513806 MYF5P13349 255 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 PAMP19021 973 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 MSH3P20585 1137 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 HTR1BP28222 390 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms