RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 ERMARDQ5T6L9 678 aa13.74□□□□□ -0.21
SPCS3-204ENST00000513139 ARMC12Q5T9G4 340 aa13.74□□□□□ -0.21
SPCS3-204ENST00000513139 LRRC66Q68CR7 880 aa13.74□□□□□ -0.21
SPCS3-204ENST00000513139 JMJD6Q6NYC1 403 aaPredicted RBP13.74□□□□□ -0.21
SPCS3-204ENST00000513139 RFLNAQ6ZTI6 216 aa13.74□□□□□ -0.21
SPCS3-204ENST00000513139 PPP1R3BQ86XI6 285 aa13.74□□□□□ -0.21
SPCS3-204ENST00000513139 BBS5Q8N3I7 341 aa13.74□□□□□ -0.21
SPCS3-204ENST00000513139 PRR7Q8TB68 274 aa13.74□□□□□ -0.21
SPCS3-204ENST00000513139 FNIP1Q8TF40 1166 aa13.74□□□□□ -0.21
SPCS3-204ENST00000513139 CT55Q8WUE5 264 aa13.74□□□□□ -0.21
SPCS3-204ENST00000513139 PIH1D2Q8WWB5 315 aa13.74□□□□□ -0.21
SPCS3-204ENST00000513139 FCRL4Q96PJ5 515 aa13.74□□□□□ -0.21
SPCS3-204ENST00000513139 BRD8Q9H0E9 1235 aa13.74□□□□□ -0.21
SPCS3-204ENST00000513139 DHX35Q9H5Z1 703 aaKnown RBP13.74□□□□□ -0.21
SPCS3-204ENST00000513139 GPATCH2LQ9NWQ4 482 aa13.74□□□□□ -0.21
SPCS3-204ENST00000513139 OGFRQ9NZT2 677 aa13.74□□□□□ -0.21
SPCS3-204ENST00000513139 DPM1O60762 260 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 UBXN7O94888 489 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 PEX11BO96011 259 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 CLCNKAP51800 687 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 POLR2FP61218 127 aaKnown RBP13.73□□□□□ -0.21
SPCS3-204ENST00000513139 MRPL49Q13405 166 aaKnown RBP13.73□□□□□ -0.21
SPCS3-204ENST00000513139 PTPRRQ15256 657 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 CHRNA6Q15825 494 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 CA9Q16790 459 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 DCUN1D2Q6PH85 259 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 PRSS42Q7Z5A4 293 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 SYVN1Q86TM6 617 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 PSTKQ8IV42 348 aaKnown RBP13.73□□□□□ -0.21
SPCS3-204ENST00000513139 SLC34A3Q8N130 599 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 PGBD5Q8N414 524 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 NEK11Q8NG66 645 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 KLHL6Q8WZ60 621 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 AGAP2Q99490 1192 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 ING2Q9H160 280 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 NLRC4Q9NPP4 1024 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 ACSS2Q9NR19 701 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 ERRFI1Q9UJM3 462 aaPredicted RBP13.73□□□□□ -0.21
SPCS3-204ENST00000513139 DNPEPQ9ULA0 475 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 KCNK6Q9Y257 313 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 PRKAB1Q9Y478 270 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 PCYT1BQ9Y5K3 369 aaPredicted RBP13.73□□□□□ -0.21
SPCS3-204ENST00000513139 F8P00451 2351 aa13.73□□□□□ -0.21
SPCS3-204ENST00000513139 MDC1Q14676 2089 aaKnown RBP13.72□□□□□ -0.21
SPCS3-204ENST00000513139 PIKFYVEQ9Y2I7 2098 aa13.72□□□□□ -0.21
SPCS3-204ENST00000513139 SETD2Q9BYW2 2564 aaPredicted RBP13.72□□□□□ -0.21
SPCS3-204ENST00000513139 ADGRG4Q8IZF6 3080 aa13.72□□□□□ -0.21
SPCS3-204ENST00000513139 SNX2O60749 519 aa13.72□□□□□ -0.21
SPCS3-204ENST00000513139 CEACAM4O75871 244 aa13.72□□□□□ -0.21
SPCS3-204ENST00000513139 ATP1A1P05023 1023 aaKnown RBP13.72□□□□□ -0.21
SPCS3-204ENST00000513139 ACP5P13686 325 aa13.72□□□□□ -0.21
SPCS3-204ENST00000513139 CTPS1P17812 591 aa13.72□□□□□ -0.21
SPCS3-204ENST00000513139 POU3F2P20265 443 aaPredicted RBP13.72□□□□□ -0.21
SPCS3-204ENST00000513139 PTPN4P29074 926 aa13.72□□□□□ -0.21
SPCS3-204ENST00000513139 PBX1P40424 430 aa13.72□□□□□ -0.21
SPCS3-204ENST00000513139 SEPHS1P49903 392 aa13.72□□□□□ -0.21
SPCS3-204ENST00000513139 STC1P52823 247 aa13.72□□□□□ -0.21
SPCS3-204ENST00000513139 C1QL3Q5VWW1 255 aa13.72□□□□□ -0.21
SPCS3-204ENST00000513139 TMEM26Q6ZUK4 368 aa13.72□□□□□ -0.21
SPCS3-204ENST00000513139 BPHLQ86WA6 291 aaPredicted RBP13.72□□□□□ -0.21
SPCS3-204ENST00000513139 PHYKPLQ8IUZ5 450 aa13.72□□□□□ -0.21
SPCS3-204ENST00000513139 Q8NA96 180 aa13.72□□□□□ -0.21
SPCS3-204ENST00000513139 TCTN2Q96GX1 697 aa13.72□□□□□ -0.21
SPCS3-204ENST00000513139 TGM7Q96PF1 710 aa13.72□□□□□ -0.21
SPCS3-204ENST00000513139 PLEKHG4BQ96PX9 1271 aa13.72□□□□□ -0.21
SPCS3-204ENST00000513139 SNRNP25Q9BV90 132 aaKnown RBP13.72□□□□□ -0.21
SPCS3-204ENST00000513139 RIOK2Q9BVS4 552 aaKnown RBP13.72□□□□□ -0.21
SPCS3-204ENST00000513139 SLAMF7Q9NQ25 335 aa13.72□□□□□ -0.21
SPCS3-204ENST00000513139 CNOT6Q9ULM6 557 aaKnown RBP13.72□□□□□ -0.21
SPCS3-204ENST00000513139 SPTBP11277 2137 aa13.72□□□□□ -0.21
SPCS3-204ENST00000513139 A0A0J9YYE9 177 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 A0A0U1RQS6 177 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 GPR37O15354 613 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 FZD6O60353 706 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 RASSF9O75901 435 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 TRBC1P01850 177 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 PDHA1P08559 390 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 AMD1P17707 334 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 NELFEP18615 380 aaKnown RBP13.71□□□□□ -0.21
SPCS3-204ENST00000513139 LPOP22079 712 aaPredicted RBP13.71□□□□□ -0.21
SPCS3-204ENST00000513139 LEPRP48357 1165 aaKnown RBP13.71□□□□□ -0.21
SPCS3-204ENST00000513139 CCL11P51671 97 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 RPS15P62841 145 aaKnown RBP13.71□□□□□ -0.21
SPCS3-204ENST00000513139 OGDHQ02218 1023 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 LAMB3Q13751 1172 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 DPYSQ14117 519 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 CPZQ66K79 652 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 PNPLA2Q96AD5 504 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 RNF31Q96EP0 1072 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 ELMO2Q96JJ3 720 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 KCTD15Q96SI1 283 aaPredicted RBP13.71□□□□□ -0.21
SPCS3-204ENST00000513139 TRIM5Q9C035 493 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 RAB33BQ9H082 229 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 CARD9Q9H257 536 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 SLC24A3Q9HC58 644 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 PDE7BQ9NP56 450 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 EPHA6Q9UF33 1036 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 SRPK3Q9UPE1 567 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 SLC5A6Q9Y289 635 aa13.71□□□□□ -0.21
SPCS3-204ENST00000513139 SLC30A1Q9Y6M5 507 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms