RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 ZNF527Q8NB42 609 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 FBXO15Q8NCQ5 510 aaPredicted RBP4.22□□□□□ -1.73
VCAN-209ENST00000513016 OR2AP1Q8NGE2 309 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 OR4A15Q8NGL6 344 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 OR2W6PQ8NHA6 318 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 AUTS2Q8WXX7 1259 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 TRIB2Q92519 343 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 FAM3CQ92520 227 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 USP6NLQ92738 828 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 KLK6Q92876 244 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 NTAN1Q96AB6 310 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 TEKT5Q96M29 485 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 DGAT2Q96PD7 388 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 PLEKHG4BQ96PX9 1271 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 GAL3ST4Q96RP7 486 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 REXO4Q9GZR2 422 aaKnown RBP4.22□□□□□ -1.73
VCAN-209ENST00000513016 RHOJQ9H4E5 214 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 CA14Q9ULX7 337 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 FCHO1O14526 889 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 RFXANKO14593 260 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 TNFRSF10BO14763 440 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 AZIN1O14977 448 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 COQ9O75208 318 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 LATS1O95835 1130 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 NTRK1P04629 796 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 RHOP08100 348 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 PIRTP0C851 137 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 NQO1P15559 274 aaKnown RBP4.22□□□□□ -1.73
VCAN-209ENST00000513016 GRIA4P48058 902 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 KCNJ5P48544 419 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 SLC7A2P52569 658 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 MAPK12P53778 367 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 PER3P56645 1201 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 RPL38P63173 70 aaKnown RBP4.22□□□□□ -1.73
VCAN-209ENST00000513016 RPS21P63220 83 aaKnown RBP4.22□□□□□ -1.73
VCAN-209ENST00000513016 FAAP100Q0VG06 881 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 NOMO1Q15155 1222 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 FAM180AQ6UWF9 173 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 C17orf99Q6UX52 265 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 SERPINA9Q86WD7 417 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 PLA2G15Q8NCC3 412 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 CENPIQ92674 756 aaPredicted RBP4.22□□□□□ -1.73
VCAN-209ENST00000513016 MR1Q95460 341 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 NXPE3Q969Y0 559 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 TUBGCP5Q96RT8 1024 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 MCMBPQ9BTE3 642 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 ZDHHC3Q9NYG2 299 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 IGSF9Q9P2J2 1179 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 TCRBV21S2A2A0A5A6 115 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 CCT8L1PA6NM43 557 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 TTLL8A6PVC2 850 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 DUX1O43812 170 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 CLDN9O95484 217 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 MMP8P22894 467 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 HNRNPKP61978 463 aaKnown RBP eCLIP4.22□□□□□ -1.73
VCAN-209ENST00000513016 PRKG2Q13237 762 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 TMED1Q13445 227 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 PLEKHG6Q3KR16 790 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 TIMM50Q3ZCQ8 353 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 TCHHL1Q5QJ38 904 aaPredicted RBP4.22□□□□□ -1.73
VCAN-209ENST00000513016 TCEAL6Q6IPX3 200 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 ZFP1Q6P2D0 407 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 ATCAYQ86WG3 371 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 CRYBG2Q8N1P7 616 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 OR4K17Q8NGC6 315 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 TEX47Q8TBZ9 253 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 ZBTB10Q96DT7 871 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 B3GNT5Q9BYG0 378 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 KLHL4Q9C0H6 718 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.22□□□□□ -1.73
VCAN-209ENST00000513016 CLN6Q9NWW5 311 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 PHF24Q9UPV7 400 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 WNT6Q9Y6F9 365 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 DUXAA6NLW8 204 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 SIN3BO75182 1162 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 TYRP14679 529 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 ENDOUP21128 410 aaKnown RBP4.21□□□□□ -1.73
VCAN-209ENST00000513016 STAT5AP42229 794 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 CASP5P51878 434 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 TAS2R41P59536 307 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 FOXK1P85037 733 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 INAQ16352 499 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 MYLK3Q32MK0 819 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 EIPR1Q53HC9 387 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 MZT2AQ6P582 158 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 SERINC5Q86VE9 423 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 TMEM126BQ8IUX1 230 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 SCUBE1Q8IWY4 988 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 VPS35Q96QK1 796 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 PSKH2Q96QS6 385 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 PANX1Q96RD7 426 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 TSC22D3Q99576 134 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 MCOLN1Q9GZU1 580 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 DMGDHQ9UI17 866 aaKnown RBP4.21□□□□□ -1.73
VCAN-209ENST00000513016 PCDHGA2Q9Y5H1 932 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 SNX13Q9Y5W8 968 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 RICTORQ6R327 1708 aa4.21□□□□□ -1.73
VCAN-209ENST00000513016 HEPACAM2A8MVW5 462 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 RIPK2O43353 540 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 TSPAN6O43657 245 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms