RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 LRCH4O75427 683 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 CEACAM4O75871 244 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 TRBC1P01850 177 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 ATP1A1P05023 1023 aaKnown RBP9.26□□□□□ -0.93
NEDD9-211ENST00000508546 PDHA1P08559 390 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 ACP5P13686 325 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 AMD1P17707 334 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 EEF1GP26641 437 aaKnown RBP9.26□□□□□ -0.93
NEDD9-211ENST00000508546 PTPN4P29074 926 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 SEPHS1P49903 392 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 MAXP61244 160 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 SYCP1Q15431 976 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 CHRNA6Q15825 494 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 CAMK4Q16566 473 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 TCP11X2Q5H9J9 407 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 PPP6R3Q5H9R7 873 aaPredicted RBP9.26□□□□□ -0.93
NEDD9-211ENST00000508546 CPZQ66K79 652 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 JMJD6Q6NYC1 403 aaPredicted RBP9.26□□□□□ -0.93
NEDD9-211ENST00000508546 CYP4V2Q6ZWL3 525 aaPredicted RBP9.26□□□□□ -0.93
NEDD9-211ENST00000508546 SYVN1Q86TM6 617 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 PHYKPLQ8IUZ5 450 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 MCOLN2Q8IZK6 566 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 AOPEPQ8N6M6 819 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 ARFGAP1Q8N6T3 406 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 Q8NA96 180 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 PRR7Q8TB68 274 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 RNF31Q96EP0 1072 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 TGM7Q96PF1 710 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 PLEKHG4BQ96PX9 1271 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 PEBP4Q96S96 227 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 ING2Q9H160 280 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 CARD9Q9H257 536 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 NLRC4Q9NPP4 1024 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 ACSS2Q9NR19 701 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 CWC15Q9P013 229 aaKnown RBP9.26□□□□□ -0.93
NEDD9-211ENST00000508546 SEMA5BQ9P283 1151 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 EPHA6Q9UF33 1036 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 SLC30A1Q9Y6M5 507 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 ANKRD12Q6UB98 2062 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 EPHB6O15197 1021 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 GRID2O43424 1007 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 NUAK1O60285 661 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 DPM1O60762 260 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 RASSF9O75901 435 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 RNF8O76064 485 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 TIAF1O95411 115 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 VIPP01282 170 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 TYRP1P17643 537 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 NELFEP18615 380 aaKnown RBP9.25□□□□□ -0.93
NEDD9-211ENST00000508546 LPOP22079 712 aaPredicted RBP9.25□□□□□ -0.93
NEDD9-211ENST00000508546 PSMA2P25787 234 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 SLC19A1P41440 591 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 MMP13P45452 471 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 CAPZBP47756 277 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 LEPRP48357 1165 aaKnown RBP9.25□□□□□ -0.93
NEDD9-211ENST00000508546 KLK7P49862 253 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 CCL11P51671 97 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 CDH6P55285 790 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 LAMB3Q13751 1172 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 HENMT1Q5T8I9 393 aaKnown RBP9.25□□□□□ -0.93
NEDD9-211ENST00000508546 MARC1Q5VT66 337 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 CACHD1Q5VU97 1274 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 BPHLQ86WA6 291 aaPredicted RBP9.25□□□□□ -0.93
NEDD9-211ENST00000508546 MMP21Q8N119 569 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 NSMCE1Q8WV22 266 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 NANOS1Q8WY41 292 aaKnown RBP9.25□□□□□ -0.93
NEDD9-211ENST00000508546 ELMO2Q96JJ3 720 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 SMIM14Q96QK8 99 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 WDR24Q96S15 920 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 LYSMD1Q96S90 227 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 RAB33BQ9H082 229 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 ZWILCHQ9H900 591 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 PDE7BQ9NP56 450 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 SLAMF7Q9NQ25 335 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 FAM207AQ9NSI2 230 aaPredicted RBP9.25□□□□□ -0.93
NEDD9-211ENST00000508546 SAMSN1Q9NSI8 373 aaKnown RBP9.25□□□□□ -0.93
NEDD9-211ENST00000508546 PCSK1NQ9UHG2 260 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 ADGRG1Q9Y653 693 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 FER1L5A0AVI2 2057 aa9.25□□□□□ -0.93
NEDD9-211ENST00000508546 FADS2P1A8MWK0 482 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 GPR89AB7ZAQ6 455 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 KIF1CO43896 1103 aaKnown RBP9.24□□□□□ -0.93
NEDD9-211ENST00000508546 PRPSAP2O60256 369 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 GPR89BP0CG08 455 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 ATP1A3P13637 1013 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 HOXB4P17483 251 aaPredicted RBP9.24□□□□□ -0.93
NEDD9-211ENST00000508546 MIPP30301 263 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 SPINT3P49223 89 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 EPHB1P54762 984 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 RPS18P62269 152 aaKnown RBP9.24□□□□□ -0.93
NEDD9-211ENST00000508546 RPS15P62841 145 aaKnown RBP9.24□□□□□ -0.93
NEDD9-211ENST00000508546 CHAF1BQ13112 559 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 MAMLD1Q13495 774 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 SKOR2Q2VWA4 1001 aaPredicted RBP9.24□□□□□ -0.93
NEDD9-211ENST00000508546 DPCR1Q3MIW9 517 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 SLC6A19Q695T7 634 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 ALG1LQ6GMV1 187 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 PLEKHA7Q6IQ23 1121 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 ACAD10Q6JQN1 1059 aa9.24□□□□□ -0.93
NEDD9-211ENST00000508546 PWWP2BQ6NUJ5 590 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms