RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 TM7SF3Q9NS93 570 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 FAM86C1Q9NVL1 165 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 ZDHHC3Q9NYG2 299 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 RAPGEFL1Q9UHV5 662 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 ACSL5Q9ULC5 683 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 CNOT6Q9ULM6 557 aaKnown RBP8.38□□□□□ -1.07
PDGFC-205ENST00000506880 ARL5AQ9Y689 179 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 FAM169AQ9Y6X4 670 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 DMDP11532 3685 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 ADAMTS9Q9P2N4 1935 aa8.38□□□□□ -1.07
PDGFC-205ENST00000506880 SPTBN4Q9H254 2564 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 KIR2DS5A0A0G2JLQ3 304 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 A0A0G2JNG1 304 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 KIR2DS3K7RE56 304 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 GAPDHSO14556 408 aaPredicted RBP8.37□□□□□ -1.07
PDGFC-205ENST00000506880 CDX4O14627 284 aaPredicted RBP8.37□□□□□ -1.07
PDGFC-205ENST00000506880 AQP9O43315 295 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 KDM1AO60341 852 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 TMEM63AO94886 807 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 CDK14O94921 469 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 TRIM16O95361 564 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 FTH1P02794 183 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 ESR1P03372 595 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 CEACAM5P06731 702 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 CEACAM1P13688 526 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 CTSEP14091 401 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 JUNDP17535 347 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 MSH3P20585 1137 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 MAOBP27338 520 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 NDUFS1P28331 727 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 ATP5DP30049 168 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 FOXN2P32314 431 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 RPL21P46778 160 aaKnown RBP8.37□□□□□ -1.07
PDGFC-205ENST00000506880 CD151P48509 253 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 POLD2P49005 469 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 PRLHRP49683 370 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 ITGA8P53708 1063 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 TMEM115Q12893 351 aaPredicted RBP8.37□□□□□ -1.07
PDGFC-205ENST00000506880 SEPT6Q14141 434 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 KIR2DS5Q14953 304 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 ANKRD20A4Q4UJ75 823 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 ATP13A5Q4VNC0 1218 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 PYCR3Q53H96 274 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 LRRC73Q5JTD7 316 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 DNTTIP2Q5QJE6 756 aaKnown RBP8.37□□□□□ -1.07
PDGFC-205ENST00000506880 FAXCQ5TGI0 409 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 STPG1Q5TH74 334 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 OGFOD3Q6PK18 319 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 ENPP7Q6UWV6 458 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 KANSL1Q7Z3B3 1105 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 KDELC2Q7Z4H8 507 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 PIP4P1Q86T03 277 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 SLC26A11Q86WA9 606 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 SPATS2Q86XZ4 545 aaKnown RBP8.37□□□□□ -1.07
PDGFC-205ENST00000506880 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.37□□□□□ -1.07
PDGFC-205ENST00000506880 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.37□□□□□ -1.07
PDGFC-205ENST00000506880 CDKL2Q92772 493 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 SCAMP4Q969E2 229 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 SH3KBP1Q96B97 665 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 DNAJC1Q96KC8 554 aaKnown RBP8.37□□□□□ -1.07
PDGFC-205ENST00000506880 OR2M4Q96R27 311 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 DPEP2Q9H4A9 486 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 STN1Q9H668 368 aaKnown RBP8.37□□□□□ -1.07
PDGFC-205ENST00000506880 LATS2Q9NRM7 1088 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 CATSPERZQ9NTU4 200 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 APOBEC3BQ9UH17 382 aaKnown RBP8.37□□□□□ -1.07
PDGFC-205ENST00000506880 CRLS1Q9UJA2 301 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 CDV3Q9UKY7 258 aaKnown RBP8.37□□□□□ -1.07
PDGFC-205ENST00000506880 COQ6Q9Y2Z9 468 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 SNX11Q9Y5W9 270 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 HEBP2Q9Y5Z4 205 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 TEX264Q9Y6I9 313 aa8.37□□□□□ -1.07
PDGFC-205ENST00000506880 UBA6A0AVT1 1052 aaPredicted RBP8.36□□□□□ -1.07
PDGFC-205ENST00000506880 PRR19A6NJB7 356 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 FADS2P1A8MWK0 482 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 PRMT5O14744 637 aaPredicted RBP8.36□□□□□ -1.07
PDGFC-205ENST00000506880 LIN7AO14910 233 aaPredicted RBP8.36□□□□□ -1.07
PDGFC-205ENST00000506880 AURKAO14965 403 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 GRID2O43424 1007 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 DNAJC6O75061 913 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 USP12O75317 370 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 PRKCGP05129 697 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 ANXA6P08133 673 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 OR56A5P0C7T3 313 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 ATP1B2P14415 290 aaPredicted RBP8.36□□□□□ -1.07
PDGFC-205ENST00000506880 DGKAP23743 735 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 PMLP29590 882 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 MC4RP32245 332 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 STX2P32856 288 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 SKIV2L2P42285 1042 aaKnown RBP8.36□□□□□ -1.07
PDGFC-205ENST00000506880 GPR3P46089 330 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 VPS41P49754 854 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 CLDN2P57739 230 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 SESN2P58004 480 aaPredicted RBP8.36□□□□□ -1.07
PDGFC-205ENST00000506880 E2F1Q01094 437 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 CTBSQ01459 385 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 BNC1Q01954 994 aa8.36□□□□□ -1.07
PDGFC-205ENST00000506880 EIF2B5Q13144 721 aaKnown RBP8.36□□□□□ -1.07
PDGFC-205ENST00000506880 THOC5Q13769 683 aaKnown RBP8.36□□□□□ -1.07
PDGFC-205ENST00000506880 SPARCL1Q14515 664 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms