RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 CCDC151A5D8V7 595 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 TRABD2BA6NFA1 517 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 GPR89AB7ZAQ6 455 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 TP73O15350 636 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 NOBOXO60393 691 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 DNAJC6O75061 913 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 TCEA3O75764 348 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 SLC25A14O95258 325 aaPredicted RBP11.3□□□□□ -0.6
KDM3B-203ENST00000505756 CAPNS1P04632 268 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 RHOXF2BP0C7M4 288 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 GPR89BP0CG08 455 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 PNLIPP16233 465 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 GLB1P16278 677 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 AK4P27144 223 aaPredicted RBP11.3□□□□□ -0.6
KDM3B-203ENST00000505756 ECHS1P30084 290 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 SPAM1P38567 509 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 ACTR1BP42025 376 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 MAGEA6P43360 314 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 GDF10P55107 478 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 ACTR1AP61163 376 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 SNX1Q13596 522 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 HLTFQ14527 1009 aaKnown RBP eCLIP11.3□□□□□ -0.6
KDM3B-203ENST00000505756 C14orf28Q4W4Y0 310 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 CERCAMQ5T4B2 595 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 SLC30A9Q6PML9 568 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 PHYKPLQ8IUZ5 450 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 IFT20Q8IY31 132 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 ZDHHC1Q8WTX9 485 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 ZCCHC14Q8WYQ9 949 aaKnown RBP11.3□□□□□ -0.6
KDM3B-203ENST00000505756 GLYATL1Q969I3 302 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 CCDC74AQ96AQ1 378 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 NXPE2Q96DL1 559 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 VPS35Q96QK1 796 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 TBL1YQ9BQ87 522 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 RHOXF2Q9BQY4 288 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 PHACTR1Q9C0D0 580 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 NRSN2Q9GZP1 204 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 CCDC86Q9H6F5 360 aaKnown RBP11.3□□□□□ -0.6
KDM3B-203ENST00000505756 TRIM39Q9HCM9 518 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 BPIFA1Q9NP55 256 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 FAM114A2Q9NRY5 505 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 SPATS2LQ9NUQ6 558 aaKnown RBP11.3□□□□□ -0.6
KDM3B-203ENST00000505756 WHRNQ9P202 907 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 DKK4Q9UBT3 224 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 ZNHIT2Q9UHR6 403 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 APPL1Q9UKG1 709 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 ZNF148Q9UQR1 794 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 UTP11Q9Y3A2 253 aaKnown RBP11.3□□□□□ -0.6
KDM3B-203ENST00000505756 PKP3Q9Y446 797 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 ST14Q9Y5Y6 855 aa11.3□□□□□ -0.6
KDM3B-203ENST00000505756 C2orf81A6NN90 581 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 SMAPO00193 183 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 NUDT21O43809 227 aaKnown RBP11.29□□□□□ -0.6
KDM3B-203ENST00000505756 NUAK1O60285 661 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 SEC31AO94979 1220 aaKnown RBP11.29□□□□□ -0.6
KDM3B-203ENST00000505756 METTL18O95568 372 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 KRT14P02533 472 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 H2AFXP16104 143 aaPredicted RBP11.29□□□□□ -0.6
KDM3B-203ENST00000505756 VSNL1P62760 191 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 PDE1BQ01064 536 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 PPP1R7Q15435 360 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 TAF1AQ15573 450 aaPredicted RBP11.29□□□□□ -0.6
KDM3B-203ENST00000505756 KCTD11Q693B1 232 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 RBM44Q6ZP01 1051 aaKnown RBP11.29□□□□□ -0.6
KDM3B-203ENST00000505756 CHST15Q7LFX5 561 aaPredicted RBP11.29□□□□□ -0.6
KDM3B-203ENST00000505756 C17orf82Q86X59 251 aaPredicted RBP11.29□□□□□ -0.6
KDM3B-203ENST00000505756 BBOF1Q8ND07 529 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 BRSK1Q8TDC3 778 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 HNRNPLLQ8WVV9 542 aaKnown RBP11.29□□□□□ -0.6
KDM3B-203ENST00000505756 GRAMD1AQ96CP6 724 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 APOL2Q9BQE5 337 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 TRIM51Q9BSJ1 452 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 PARD6BQ9BYG5 372 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 LRRC40Q9H9A6 602 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 ARNT2Q9HBZ2 717 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 IL26Q9NPH9 171 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 GRHL1Q9NZI5 618 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 PAK5Q9P286 719 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 ATXN10Q9UBB4 475 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.29□□□□□ -0.6
KDM3B-203ENST00000505756 ZMIZ1Q9ULJ6 1067 aa11.29□□□□□ -0.6
KDM3B-203ENST00000505756 V9GYY5 206 aaPredicted RBP11.29□□□□□ -0.6
KDM3B-203ENST00000505756 SCN8AQ9UQD0 1980 aa11.28□□□□□ -0.6
KDM3B-203ENST00000505756 FREM2Q5SZK8 3169 aa11.28□□□□□ -0.6
KDM3B-203ENST00000505756 GLYATL1P3A0A0U1RQE8 302 aa11.28□□□□□ -0.6
KDM3B-203ENST00000505756 NTN3O00634 580 aaPredicted RBP11.28□□□□□ -0.6
KDM3B-203ENST00000505756 DYNC1I1O14576 645 aa11.28□□□□□ -0.6
KDM3B-203ENST00000505756 STX7O15400 261 aaKnown RBP11.28□□□□□ -0.6
KDM3B-203ENST00000505756 PSMD3O43242 534 aa11.28□□□□□ -0.6
KDM3B-203ENST00000505756 GRID2O43424 1007 aa11.28□□□□□ -0.6
KDM3B-203ENST00000505756 VEGFDO43915 354 aa11.28□□□□□ -0.6
KDM3B-203ENST00000505756 USP12O75317 370 aa11.28□□□□□ -0.6
KDM3B-203ENST00000505756 CSO75390 466 aaKnown RBP11.28□□□□□ -0.6
KDM3B-203ENST00000505756 CRTAMO95727 393 aa11.28□□□□□ -0.6
KDM3B-203ENST00000505756 ZNF8P17098 575 aaPredicted RBP11.28□□□□□ -0.6
KDM3B-203ENST00000505756 LPOP22079 712 aaPredicted RBP11.28□□□□□ -0.6
KDM3B-203ENST00000505756 RPL21P46778 160 aaKnown RBP11.28□□□□□ -0.6
KDM3B-203ENST00000505756 GUCY2DQ02846 1103 aa11.28□□□□□ -0.6
KDM3B-203ENST00000505756 CAV1Q03135 178 aa11.28□□□□□ -0.6
KDM3B-203ENST00000505756 MSLNQ13421 630 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms