RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 TCN2P20062 427 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 CLCNKAP51800 687 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 UBASH3AP57075 661 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 GBE1Q04446 702 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 FOXM1Q08050 763 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 DEFB109BQ30KR1 87 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 COLEC12Q5KU26 742 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 CCDC70Q6NSX1 233 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 TIPARPQ7Z3E1 657 aaKnown RBP11.88□□□□□ -0.51
CNOT4-211ENST00000498534 TRIM48Q8IWZ4 208 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 UNC5BQ8IZJ1 945 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 HDAC11Q96DB2 347 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 PLEKHG4BQ96PX9 1271 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 ZSCAN5AQ9BUG6 496 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 TBC1D10AQ9BXI6 508 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 MAK16Q9BXY0 300 aaKnown RBP11.88□□□□□ -0.51
CNOT4-211ENST00000498534 OR2AG1Q9H205 316 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 OSGEPL1Q9H4B0 414 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 UCK1Q9HA47 277 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 APMAPQ9HDC9 416 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 PRDM8Q9NQV8 689 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 ZNF71Q9NQZ8 489 aaPredicted RBP11.88□□□□□ -0.51
CNOT4-211ENST00000498534 KLC4Q9NSK0 619 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 UVRAGQ9P2Y5 699 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 PCYT1BQ9Y5K3 369 aaPredicted RBP11.88□□□□□ -0.51
CNOT4-211ENST00000498534 COL12A1Q99715 3063 aa11.88□□□□□ -0.51
CNOT4-211ENST00000498534 PTPN13Q12923 2485 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 LILRA5A6NI73 299 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 KCNK1O00180 336 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 KMOO15229 486 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 TOX3O15405 576 aaPredicted RBP11.87□□□□□ -0.51
CNOT4-211ENST00000498534 UBXN7O94888 489 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 H2AFZP0C0S5 128 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 ANKRD34CP0C6C1 535 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 ZNF8P17098 575 aaPredicted RBP11.87□□□□□ -0.51
CNOT4-211ENST00000498534 TYRP1P17643 537 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 CASRP41180 1078 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 FANCCQ00597 558 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 CDC20Q12834 499 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 SLC10A2Q12908 348 aaPredicted RBP11.87□□□□□ -0.51
CNOT4-211ENST00000498534 MAP7Q14244 749 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 IQCB1Q15051 598 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 INSCQ1MX18 579 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 SKIDA1Q1XH10 827 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 CRTC2Q53ET0 693 aaPredicted RBP11.87□□□□□ -0.51
CNOT4-211ENST00000498534 ZNF569Q5MCW4 686 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 PDPK2PQ6A1A2 396 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 C16orf46Q6P387 395 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 H2AFVQ71UI9 128 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 PQLC3Q8N755 202 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.87□□□□□ -0.51
CNOT4-211ENST00000498534 LRRN4Q8WUT4 740 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 CTNNBL1Q8WYA6 563 aaPredicted RBP11.87□□□□□ -0.51
CNOT4-211ENST00000498534 STARD8Q92502 1023 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 C9orf72Q96LT7 481 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 RNF157Q96PX1 679 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 SRPK1Q96SB4 655 aaKnown RBP11.87□□□□□ -0.51
CNOT4-211ENST00000498534 GPR63Q9BZJ6 419 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 MAGEE1Q9HCI5 957 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 ARFGAP3Q9NP61 516 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 DTLQ9NZJ0 730 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 HEY1Q9Y5J3 304 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 BSNQ9UPA5 3926 aa11.87□□□□□ -0.51
CNOT4-211ENST00000498534 VEGFDO43915 354 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 RASSF9O75901 435 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 MMP2P08253 660 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 CCNYL3P0C7X3 344 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 KDELR1P24390 212 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 STAT5AP42229 794 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 TAS2R40P59535 323 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 UBE2IP63279 158 aaKnown RBP11.86□□□□□ -0.51
CNOT4-211ENST00000498534 IFI35P80217 286 aaPredicted RBP11.86□□□□□ -0.51
CNOT4-211ENST00000498534 LSM11P83369 360 aaKnown RBP eCLIP11.86□□□□□ -0.51
CNOT4-211ENST00000498534 PPIDQ08752 370 aaKnown RBP11.86□□□□□ -0.51
CNOT4-211ENST00000498534 AP1B1Q10567 949 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 GALNT3Q14435 633 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 IL11RAQ14626 422 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 ALS2CLQ60I27 953 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 CAVIN1Q6NZI2 390 aaKnown RBP11.86□□□□□ -0.51
CNOT4-211ENST00000498534 C6orf15Q6UXA7 325 aaPredicted RBP11.86□□□□□ -0.51
CNOT4-211ENST00000498534 TMEM26Q6ZUK4 368 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 ADGRG6Q86SQ4 1221 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 NT5DC3Q86UY8 548 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 LRRTM4Q86VH4 590 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 TRAM1L1Q8N609 369 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 CNTD1Q8N815 330 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 GLYATL1Q969I3 302 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 FAF2Q96CS3 445 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 ZDHHC12Q96GR4 267 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 ABHD17AQ96GS6 310 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 ULBP3Q9BZM4 244 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 EPN3Q9H201 632 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 SHOC2Q9UQ13 582 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 KCTD3Q9Y597 815 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 RPS6KL1Q9Y6S9 549 aa11.86□□□□□ -0.51
CNOT4-211ENST00000498534 MN1Q10571 1320 aaPredicted RBP11.86□□□□□ -0.51
CNOT4-211ENST00000498534 NBASA2RRP1 2371 aa11.85□□□□□ -0.51
CNOT4-211ENST00000498534 CYSRT1A8MQ03 144 aa11.85□□□□□ -0.51
CNOT4-211ENST00000498534 PDZK1P1A8MUH7 402 aa11.85□□□□□ -0.51
CNOT4-211ENST00000498534 GOLGA6L19H0YKK7 550 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms