RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 SPINT3P49223 89 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 CCL11P51671 97 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 SEPT7Q16181 437 aaKnown RBP13.73□□□□□ -0.21
CCDC58-207ENST00000498466 UGT8Q16880 541 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 TDRD12Q587J7 1177 aaKnown RBP13.73□□□□□ -0.21
CCDC58-207ENST00000498466 HENMT1Q5T8I9 393 aaKnown RBP13.73□□□□□ -0.21
CCDC58-207ENST00000498466 FAM92BQ6ZTR7 304 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 MAMDC2Q7Z304 686 aaPredicted RBP13.73□□□□□ -0.21
CCDC58-207ENST00000498466 PRSS42Q7Z5A4 293 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 RAVER1Q8IY67 606 aaKnown RBP13.73□□□□□ -0.21
CCDC58-207ENST00000498466 TEX26Q8N6G2 289 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 AOPEPQ8N6M6 819 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 LPCAT1Q8NF37 534 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 PRR7Q8TB68 274 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 ZDHHC12Q96GR4 267 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 WDR24Q96S15 920 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 RUFY1Q96T51 708 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 TDRD1Q9BXT4 1180 aaKnown RBP13.73□□□□□ -0.21
CCDC58-207ENST00000498466 OR2AG1Q9H205 316 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 PDE7BQ9NP56 450 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 ARFGAP3Q9NP61 516 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.73□□□□□ -0.21
CCDC58-207ENST00000498466 PKD2L2Q9NZM6 624 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 ATXN10Q9UBB4 475 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 PCDHGA9Q9Y5G4 932 aaKnown RBP13.73□□□□□ -0.21
CCDC58-207ENST00000498466 ITPR2Q14571 2701 aa13.73□□□□□ -0.21
CCDC58-207ENST00000498466 CREBBPQ92793 2442 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 ARGFXA6NJG6 315 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 PDZK1P1A8MUH7 402 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 TCP11X1B4DZS4 312 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 TIAF1O95411 115 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 CA4P22748 312 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 IL1R2P27930 398 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 SLC19A1P41440 591 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 CAPZBP47756 277 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 CLCNKAP51800 687 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 RPS18P62269 152 aaKnown RBP13.72□□□□□ -0.21
CCDC58-207ENST00000498466 DSC2Q02487 901 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 UBXN1Q04323 297 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 MRPL49Q13405 166 aaKnown RBP13.72□□□□□ -0.21
CCDC58-207ENST00000498466 INPP5JQ15735 1006 aaPredicted RBP13.72□□□□□ -0.21
CCDC58-207ENST00000498466 INSCQ1MX18 579 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 PLA2G4EQ3MJ16 856 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 PRR30Q53SZ7 412 aaPredicted RBP13.72□□□□□ -0.21
CCDC58-207ENST00000498466 ZNF648Q5T619 568 aaPredicted RBP13.72□□□□□ -0.21
CCDC58-207ENST00000498466 IRGCQ6NXR0 463 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 CRTC3Q6UUV7 619 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 CCHCR1Q8TD31 782 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 KLHL6Q8WZ60 621 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 RSC1A1Q92681 617 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 GPR87Q9BY21 358 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 SLC29A3Q9BZD2 475 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 ING2Q9H160 280 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 NUP62CLQ9H1M0 184 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 LUZP4Q9P127 313 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 ZNF624Q9P2J8 865 aaPredicted RBP13.72□□□□□ -0.21
CCDC58-207ENST00000498466 RARRES3Q9UL19 164 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 DNAJC16Q9Y2G8 782 aa13.72□□□□□ -0.21
CCDC58-207ENST00000498466 LGALS16A8MUM7 142 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 SLC25A14O95258 325 aaPredicted RBP13.71□□□□□ -0.21
CCDC58-207ENST00000498466 NELFEP18615 380 aaKnown RBP13.71□□□□□ -0.21
CCDC58-207ENST00000498466 CES1P23141 567 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 PTPN4P29074 926 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 PCK1P35558 622 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 DCTP40126 519 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 RPS15P62841 145 aaKnown RBP13.71□□□□□ -0.21
CCDC58-207ENST00000498466 TUBB3Q13509 450 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 IHHQ14623 411 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 CHRNA6Q15825 494 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 BOLA3Q53S33 107 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 ANKRD20A8PQ5CZ79 823 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 PWWP2BQ6NUJ5 590 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 FAM199XQ6PEV8 388 aaPredicted RBP13.71□□□□□ -0.21
CCDC58-207ENST00000498466 SYVN1Q86TM6 617 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 SIDT2Q8NBJ9 832 aaKnown RBP13.71□□□□□ -0.21
CCDC58-207ENST00000498466 ANKRD20A12PQ8NF67 263 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 LYSMD1Q96S90 227 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 AKIRIN1Q9H9L7 192 aaPredicted RBP13.71□□□□□ -0.21
CCDC58-207ENST00000498466 PCDH9Q9HC56 1237 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 MLXIPLQ9NP71 852 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 SLAMF7Q9NQ25 335 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 POT1Q9NUX5 634 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 FANCLQ9NW38 375 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 SLC23A2Q9UGH3 650 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 ZNF451Q9Y4E5 1061 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 ADGRG1Q9Y653 693 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 SCINQ9Y6U3 715 aa13.71□□□□□ -0.21
CCDC58-207ENST00000498466 PRRC2CQ9Y520 2896 aaKnown RBP13.71□□□□□ -0.22
CCDC58-207ENST00000498466 CENPEQ02224 2701 aa13.7□□□□□ -0.22
CCDC58-207ENST00000498466 LRBAP50851 2863 aa13.7□□□□□ -0.22
CCDC58-207ENST00000498466 RGSL1A5PLK6 1076 aa13.7□□□□□ -0.22
CCDC58-207ENST00000498466 CLDN1O95832 211 aa13.7□□□□□ -0.22
CCDC58-207ENST00000498466 PRLP01236 227 aa13.7□□□□□ -0.22
CCDC58-207ENST00000498466 FTLP02792 175 aaPredicted RBP13.7□□□□□ -0.22
CCDC58-207ENST00000498466 RARAP10276 462 aa13.7□□□□□ -0.22
CCDC58-207ENST00000498466 TCF4P15884 667 aa13.7□□□□□ -0.22
CCDC58-207ENST00000498466 RPL10P27635 214 aaKnown RBP13.7□□□□□ -0.22
CCDC58-207ENST00000498466 ZNF165P49910 485 aa13.7□□□□□ -0.22
CCDC58-207ENST00000498466 RPL26P61254 145 aaKnown RBP13.7□□□□□ -0.22
CCDC58-207ENST00000498466 IL10RAQ13651 578 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms