RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 PCBP4P57723 403 aaKnown RBP15.17■□□□□ 0.02
NUP50-219ENST00000497960 EIF3IQ13347 325 aaKnown RBP15.17■□□□□ 0.02
NUP50-219ENST00000497960 PRPSAP1Q14558 356 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 SLC1A5Q15758 541 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 AMZ1Q400G9 498 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 IGF2-ASQ6U949 168 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 CHST15Q7LFX5 561 aaPredicted RBP15.17■□□□□ 0.02
NUP50-219ENST00000497960 ZNF438Q7Z4V0 828 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 B3GNT8Q7Z7M8 397 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 PHYKPLQ8IUZ5 450 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 BLOC1S5Q8TDH9 187 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 GLYATL1Q969I3 302 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 LIN37Q96GY3 246 aaPredicted RBP15.17■□□□□ 0.02
NUP50-219ENST00000497960 PLEKHG4BQ96PX9 1271 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 TMEM121Q9BTD3 319 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 AP1M1Q9BXS5 423 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 FOXP3Q9BZS1 431 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 OR2AG1Q9H205 316 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 BPIFA1Q9NP55 256 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 ATXN10Q9UBB4 475 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 ATXN7L1Q9ULK2 861 aaPredicted RBP15.17■□□□□ 0.02
NUP50-219ENST00000497960 ZNF148Q9UQR1 794 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 PRKAB1Q9Y478 270 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 KIF26BQ2KJY2 2108 aa15.17■□□□□ 0.02
NUP50-219ENST00000497960 ZZEF1O43149 2961 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 GRID2O43424 1007 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 TUBB4AP04350 444 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 ACP5P13686 325 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 ZNF8P17098 575 aaPredicted RBP15.16■□□□□ 0.02
NUP50-219ENST00000497960 CCKBRP32239 447 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 MLLT3P42568 568 aaPredicted RBP15.16■□□□□ 0.02
NUP50-219ENST00000497960 PAFAH1B1P43034 410 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 GPR3P46089 330 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 OR1D5P58170 312 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 B4GALNT1Q00973 533 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 CCNG2Q16589 344 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 CLPPQ16740 277 aaPredicted RBP15.16■□□□□ 0.02
NUP50-219ENST00000497960 MAP9Q49MG5 647 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 ANKRD20A2Q5SQ80 823 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 ANKRD20A1Q5TYW2 823 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 ANKRD20A3Q5VUR7 823 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 GLT6D1Q7Z4J2 308 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 FBXO39Q8N4B4 442 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 FAM71DQ8N9W8 422 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 ZNF248Q8NDW4 579 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 PATE1Q8WXA2 126 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 SLC46A1Q96NT5 459 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 PPP1R2P1Q96PQ5 205 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 ARFGAP3Q9NP61 516 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 HOMER3Q9NSC5 361 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.16■□□□□ 0.02
NUP50-219ENST00000497960 KCNK6Q9Y257 313 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 AAR2Q9Y312 384 aaKnown RBP15.16■□□□□ 0.02
NUP50-219ENST00000497960 PKP3Q9Y446 797 aa15.16■□□□□ 0.02
NUP50-219ENST00000497960 A0A1W2PNU3 283 aaPredicted RBP15.15■□□□□ 0.02
NUP50-219ENST00000497960 PLD2O14939 933 aa15.15■□□□□ 0.02
NUP50-219ENST00000497960 B4GAT1O43505 415 aa15.15■□□□□ 0.02
NUP50-219ENST00000497960 TNFSF15O95150 251 aa15.15■□□□□ 0.02
NUP50-219ENST00000497960 CPNE6O95741 557 aa15.15■□□□□ 0.02
NUP50-219ENST00000497960 SLC2A4P14672 509 aa15.15■□□□□ 0.02
NUP50-219ENST00000497960 GDF10P55107 478 aa15.15■□□□□ 0.02
NUP50-219ENST00000497960 NR1D2Q14995 579 aa15.15■□□□□ 0.02
NUP50-219ENST00000497960 OASLQ15646 514 aaKnown RBP15.15■□□□□ 0.02
NUP50-219ENST00000497960 ZNF648Q5T619 568 aaPredicted RBP15.15■□□□□ 0.02
NUP50-219ENST00000497960 ARHGEF18Q6ZSZ5 1173 aa15.15■□□□□ 0.02
NUP50-219ENST00000497960 RAB11FIP2Q7L804 512 aa15.15■□□□□ 0.02
NUP50-219ENST00000497960 ADGRG6Q86SQ4 1221 aa15.15■□□□□ 0.02
NUP50-219ENST00000497960 PIM3Q86V86 326 aa15.15■□□□□ 0.02
NUP50-219ENST00000497960 TTC30BQ8N4P2 665 aa15.15■□□□□ 0.02
NUP50-219ENST00000497960 PRELID2Q8N945 189 aa15.15■□□□□ 0.02
NUP50-219ENST00000497960 CCDC89Q8N998 374 aa15.15■□□□□ 0.02
NUP50-219ENST00000497960 GDAP1Q8TB36 358 aa15.15■□□□□ 0.02
NUP50-219ENST00000497960 LRRC45Q96CN5 670 aa15.15■□□□□ 0.02
NUP50-219ENST00000497960 SPATA13Q96N96 652 aa15.15■□□□□ 0.02
NUP50-219ENST00000497960 FICDQ9BVA6 458 aa15.15■□□□□ 0.02
NUP50-219ENST00000497960 STN1Q9H668 368 aaKnown RBP15.15■□□□□ 0.02
NUP50-219ENST00000497960 ASCL3Q9NQ33 180 aa15.15■□□□□ 0.02
NUP50-219ENST00000497960 PCYT1BQ9Y5K3 369 aaPredicted RBP15.15■□□□□ 0.02
NUP50-219ENST00000497960 CFAP47Q6ZTR5 3102 aa15.15■□□□□ 0.02
NUP50-219ENST00000497960 PTPRQQ9UMZ3 2332 aa15.15■□□□□ 0.02
NUP50-219ENST00000497960 CACNA1GO43497 2377 aa15.14■□□□□ 0.01
NUP50-219ENST00000497960 AHCTF1Q8WYP5 2266 aa15.14■□□□□ 0.01
NUP50-219ENST00000497960 ADAMTS20P59510 1910 aa15.14■□□□□ 0.01
NUP50-219ENST00000497960 TRBV23OR9-2A0A075B6M9 112 aa15.14■□□□□ 0.01
NUP50-219ENST00000497960 PPM1DO15297 605 aa15.14■□□□□ 0.01
NUP50-219ENST00000497960 VEGFDO43915 354 aa15.14■□□□□ 0.01
NUP50-219ENST00000497960 SNX2O60749 519 aa15.14■□□□□ 0.01
NUP50-219ENST00000497960 PHF2O75151 1096 aa15.14■□□□□ 0.01
NUP50-219ENST00000497960 PPFIA2O75334 1257 aa15.14■□□□□ 0.01
NUP50-219ENST00000497960 CDK14O94921 469 aa15.14■□□□□ 0.01
NUP50-219ENST00000497960 AGTP01019 485 aa15.14■□□□□ 0.01
NUP50-219ENST00000497960 IFNB1P01574 187 aa15.14■□□□□ 0.01
NUP50-219ENST00000497960 ITPKBP27987 946 aa15.14■□□□□ 0.01
NUP50-219ENST00000497960 PSMB4P28070 264 aa15.14■□□□□ 0.01
NUP50-219ENST00000497960 SPAM1P38567 509 aa15.14■□□□□ 0.01
NUP50-219ENST00000497960 PPM1FP49593 454 aaPredicted RBP15.14■□□□□ 0.01
NUP50-219ENST00000497960 ZFP36L1Q07352 338 aaKnown RBP15.14■□□□□ 0.01
NUP50-219ENST00000497960 GTF2H3Q13889 308 aa15.14■□□□□ 0.01
NUP50-219ENST00000497960 PHF19Q5T6S3 580 aa15.14■□□□□ 0.01
NUP50-219ENST00000497960 DRICH1Q6PGQ1 229 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms