RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 CENPMQ9NSP4 180 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 HOXC10Q9NYD6 342 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 LARSQ9P2J5 1176 aaKnown RBP6.06□□□□□ -1.44
BRCA1-224ENST00000497488 ANKFY1Q9P2R3 1169 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 CAB39Q9Y376 341 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-224ENST00000497488 TMED5Q9Y3A6 229 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 LSM4Q9Y4Z0 139 aaKnown RBP6.06□□□□□ -1.44
BRCA1-224ENST00000497488 ATP7AQ04656 1500 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 PTPRMP28827 1452 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 PLEKHH2Q8IVE3 1493 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 LOC100996750A0A140TA64 210 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 TCRBV7S3A2A0A539 114 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 TRIM77I1YAP6 450 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 PPP6CO00743 305 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 CES2O00748 559 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 JRKO75564 520 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 PRDM1O75626 825 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 MOCS3O95396 460 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 AK1P00568 194 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 EBLN1P0CF75 366 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 VPREB1P12018 145 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 AREGP15514 252 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 GDI1P31150 447 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 SHMT1P34896 483 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 PTGER1P34995 402 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 SOX6P35712 828 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 WNT5AP41221 380 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 ATP5OP48047 213 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 DIO1P49895 249 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 MXI1P50539 228 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 EEFSECP57772 596 aaKnown RBP6.05□□□□□ -1.44
BRCA1-224ENST00000497488 JAG1P78504 1218 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 MRPS34P82930 218 aaKnown RBP6.05□□□□□ -1.44
BRCA1-224ENST00000497488 COG7P83436 770 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 UGCGQ16739 394 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 IFI44LQ53G44 452 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 KLHL26Q53HC5 615 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 FASTKD1Q53R41 847 aaKnown RBP6.05□□□□□ -1.44
BRCA1-224ENST00000497488 ARL13AQ5H913 290 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-224ENST00000497488 PRSS36Q5K4E3 855 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 TREML2Q5T2D2 321 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 CYP4A22Q5TCH4 519 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 PRAMEF8Q5VWM4 474 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 SLFN13Q68D06 897 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 BRAT1Q6PJG6 821 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 LCTLQ6UWM7 567 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 ZYG11AQ6WRX3 759 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 ZBTB49Q6ZSB9 765 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 MTSS1LQ765P7 747 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 SYVN1Q86TM6 617 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 MAPKAPK5Q8IW41 473 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 BATF2Q8N1L9 274 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 OR56B2PQ8NGI1 322 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 OR52M1Q8NGK5 317 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 OR8K5Q8NH50 307 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 NCOA7Q8NI08 942 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 EDC3Q96F86 508 aaKnown RBP6.05□□□□□ -1.44
BRCA1-224ENST00000497488 RRNAD1Q96FB5 475 aaKnown RBP6.05□□□□□ -1.44
BRCA1-224ENST00000497488 BSCL2Q96G97 398 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-224ENST00000497488 ZNF560Q96MR9 790 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 TEFMQ96QE5 360 aaKnown RBP6.05□□□□□ -1.44
BRCA1-224ENST00000497488 CARD6Q9BX69 1037 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 KRTAP4-6Q9BYQ5 205 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 LMAN1LQ9HAT1 526 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 RNPEPL1Q9HAU8 725 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 TXNRD2Q9NNW7 524 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 FAM118AQ9NWS6 357 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 MTMR10Q9NXD2 777 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 TMOD3Q9NYL9 352 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 POLLQ9UGP5 575 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 PCSK1NQ9UHG2 260 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 MBD1Q9UIS9 605 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-224ENST00000497488 CEPT1Q9Y6K0 416 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.05□□□□□ -1.44
BRCA1-224ENST00000497488 PMF1-BGLAPU3KQ54 211 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 REREQ9P2R6 1566 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 NSD2O96028 1365 aa6.05□□□□□ -1.44
BRCA1-224ENST00000497488 RIMS1Q86UR5 1692 aaKnown RBP6.04□□□□□ -1.44
BRCA1-224ENST00000497488 A0A0G2JPF8 293 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 C13orf42A0A1B0GVH6 325 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 A0A1B0GWJ7 208 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 C1orf226A1L170 272 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 TTC34A8MYJ7 566 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 HNRNPCL3B7ZW38 293 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 H0YIN7 160 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 AP4M1O00189 453 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 PRYO14603 147 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 SUV39H1O43463 412 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 MFAP3LO75121 409 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 TOMM70O94826 608 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 PRAMEF12O95522 483 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 ELANEP08246 267 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 ADH4P08319 380 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 IL6RP08887 468 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-224ENST00000497488 RFPL3SP0C7P2 107 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 HNRNPCL4P0DMR1 293 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 TCF4P15884 667 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 TGM2P21980 687 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 ITPKBP27987 946 aa6.04□□□□□ -1.44
BRCA1-224ENST00000497488 EPHB2P29323 1055 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms