RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 TCAF2A6NFQ2 919 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 TMEM200CA6NKL6 621 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 BTBD18B2RXH4 712 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 TCP10L2B9ZVM9 353 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 NPIPB11E5RHQ5 1161 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 DDX39AO00148 427 aaKnown RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 QSOX1O00391 747 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 DSCR3O14972 297 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 HYAL3O43820 417 aaPredicted RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 CEP104O60308 925 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 ZC3H11AO75152 810 aaKnown RBP eCLIP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 SEC22BO75396 215 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 PSMD10O75832 226 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 PNPP00491 289 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 PGK1P00558 417 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 C1RP00736 705 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 IGHDP01880 384 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 TFP02787 698 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 ZFYP08048 801 aaPredicted RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 SNRNP70P08621 437 aaKnown RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 SRCP12931 536 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 CREB1P16220 341 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 PPP3CBP16298 524 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 ZNF37AP17032 561 aaPredicted RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 HLA-DPA1P20036 260 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 CD72P21854 359 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 TCEA1P23193 301 aaKnown RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 SP100P23497 879 aaPredicted RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 NDUFS1P28331 727 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 APOBEC3AP31941 199 aaPredicted RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 SLC8A1P32418 973 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 PTGER1P34995 402 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 STAT6P42226 847 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 CPA2P48052 419 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 CAMPP49913 170 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 KHKP50053 298 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 NOVA1P51513 510 aaKnown RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 MFAP4P55083 255 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 RPS8P62241 208 aaKnown RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 RAE1P78406 368 aaKnown RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 BFSP2Q13515 415 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 PKP1Q13835 747 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 CAPSQ13938 189 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 FGFBP1Q14512 234 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 IL11RAQ14626 422 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 SSPNQ14714 243 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 LASP1Q14847 261 aaKnown RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 GEN1Q17RS7 908 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 ZNF674Q2M3X9 581 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 P3H1Q32P28 736 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 CD300EQ496F6 205 aaPredicted RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 PREPLQ4J6C6 727 aaPredicted RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 SETMARQ53H47 684 aaPredicted RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 ZNF805Q5CZA5 627 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 GLRA4Q5JXX5 417 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 CCDC158Q5M9N0 1113 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 C6orf141Q5SZD1 244 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 TREML2Q5T2D2 321 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 STPG1Q5TH74 334 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 LAIR1Q6GTX8 287 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 ANKRD16Q6P6B7 361 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 IL20RBQ6UXL0 311 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 NHLRC1Q6VVB1 395 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 SYNE3Q6ZMZ3 975 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 Q6ZWC4 215 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 ZNF804AQ7Z570 1209 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 DNAJB7Q7Z6W7 309 aaPredicted RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 DSG4Q86SJ6 1040 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 FAM160B2Q86V87 743 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 FAM185AQ8N0U4 392 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 CERS5Q8N5B7 392 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 DPP10Q8N608 796 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 SIRT6Q8N6T7 355 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 ARL10Q8N8L6 244 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 TC2NQ8N9U0 490 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 GPRC5AQ8NFJ5 357 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 TSPAN14Q8NG11 270 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 OR4N2Q8NGD1 307 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 LILRB1Q8NHL6 650 aaPredicted RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 GABPB2Q8TAK5 448 aaPredicted RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 FAM110DQ8TAY7 271 aaPredicted RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 FAM168AQ92567 244 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 HSPH1Q92598 858 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 GTF3C6Q969F1 213 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 CHFRQ96EP1 664 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 PBKQ96KB5 322 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 CABS1Q96KC9 395 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 PPP1R13BQ96KQ4 1090 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 CCDC43Q96MW1 224 aaKnown RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 SLITRK1Q96PX8 696 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 RAD9AQ99638 391 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 ADAM2Q99965 735 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 ZSWIM1Q9BR11 485 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 TMEM79Q9BSE2 394 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 THUMPD3Q9BV44 507 aaKnown RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 SSBP3Q9BWW4 388 aaPredicted RBP2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 SGPP1Q9BX95 441 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 HDHD5Q9BXW7 423 aa2.5□□□□□ -2.01
CKS1BP2-201ENST00000497342 KLHL4Q9C0H6 718 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms