RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 EIF2B4Q9UI10 523 aaKnown RBP12.32□□□□□ -0.44
SNX17-208ENST00000493711 FBXO5Q9UKT4 447 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 CORO1CQ9ULV4 474 aaPredicted RBP12.32□□□□□ -0.44
SNX17-208ENST00000493711 COMMD10Q9Y6G5 202 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 IKBKGQ9Y6K9 419 aa12.32□□□□□ -0.44
SNX17-208ENST00000493711 MYO18AQ92614 2054 aaKnown RBP12.31□□□□□ -0.44
SNX17-208ENST00000493711 IGLV3-16A0A075B6K0 115 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 UQCRHLA0A096LP55 91 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 A0A1B0GTW7 788 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 KLHL33A6NCF5 533 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 FADS2P1A8MWK0 482 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 H3BMM5 538 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 TNFRSF10CO14798 259 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 RAD51BO15315 384 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 BCAT2O15382 392 aaPredicted RBP12.31□□□□□ -0.44
SNX17-208ENST00000493711 UGT1A9O60656 530 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 AP2A2O94973 939 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 SOD1P00441 154 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 UQCRHP07919 91 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 GSTM1P09488 218 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 NUDT17P0C025 328 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 ERVK-10P10266 1014 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 UGT1A6P19224 532 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 MSH3P20585 1137 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 UGT1A1P22309 533 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 UGT1A4P22310 534 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 CD38P28907 300 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 AKT1P31749 480 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 UGT1A3P35503 534 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 UGT1A5P35504 534 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 HSD17B3P37058 310 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 NSG1P42857 185 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 LEPRP48357 1165 aaKnown RBP12.31□□□□□ -0.44
SNX17-208ENST00000493711 THOP1P52888 689 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 CSE1LP55060 971 aaKnown RBP12.31□□□□□ -0.44
SNX17-208ENST00000493711 EIF3BP55884 814 aaKnown RBP12.31□□□□□ -0.44
SNX17-208ENST00000493711 CDK3Q00526 305 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 GSTM4Q03013 218 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 SLC29A2Q14542 456 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 NFATC4Q14934 902 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 GPRC6AQ5T6X5 926 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 TEDDM1Q5T9Z0 273 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 LGSNQ5TDP6 509 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 TRMT10BQ6PF06 316 aaKnown RBP12.31□□□□□ -0.44
SNX17-208ENST00000493711 GCNT7Q6ZNI0 430 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 MARK2Q7KZI7 788 aaKnown RBP12.31□□□□□ -0.44
SNX17-208ENST00000493711 TAOK1Q7L7X3 1001 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 ERMP1Q7Z2K6 904 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 SYT12Q8IV01 421 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 CTAGE3PQ8IX95 158 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 PIANPQ8IYJ0 282 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 PLA2G15Q8NCC3 412 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 C2CD4AQ8NCU7 369 aaPredicted RBP12.31□□□□□ -0.44
SNX17-208ENST00000493711 KLHDC7BQ96G42 594 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 COX14Q96I36 57 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 AGAP2Q99490 1192 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 CPNE1Q99829 537 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 ORAI3Q9BRQ5 295 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 TSSK1BQ9BXA7 367 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 CLPBQ9H078 707 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 MIR1-1HGQ9H1L0 117 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 EBF2Q9HAK2 575 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 UGT1A7Q9HAW7 530 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 UGT1A10Q9HAW8 530 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 UGT1A8Q9HAW9 530 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 TM9SF3Q9HD45 589 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 PCDHB1Q9Y5F3 818 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 PCDHGA5Q9Y5G8 931 aa12.31□□□□□ -0.44
SNX17-208ENST00000493711 VPS13AQ96RL7 3174 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 EXOC1LA0A1B0GW35 172 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 OR51F1A6NGY5 319 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 K7ESM1 405 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 PRMT5O14744 637 aaPredicted RBP12.3□□□□□ -0.44
SNX17-208ENST00000493711 TCEA3O75764 348 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 S1PR4O95977 384 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 ESR1P03372 595 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 H2AFXP16104 143 aaPredicted RBP12.3□□□□□ -0.44
SNX17-208ENST00000493711 RPS3P23396 243 aaKnown RBP eCLIP12.3□□□□□ -0.44
SNX17-208ENST00000493711 GP5P40197 560 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 SLC1A2P43004 574 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 POLD2P49005 469 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 SERPINB9P50453 376 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 C21orf59P57076 290 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 DBN1Q16643 649 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 KBTBD12Q3ZCT8 623 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 BEND6Q5SZJ8 279 aaPredicted RBP12.3□□□□□ -0.44
SNX17-208ENST00000493711 GRTP1Q5TC63 336 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 PEAR1Q5VY43 1037 aaPredicted RBP12.3□□□□□ -0.44
SNX17-208ENST00000493711 PSAPL1Q6NUJ1 521 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 Q6ZSR6 202 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 PACS2Q86VP3 889 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 DEFB119Q8N690 84 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 C1orf216Q8TAB5 229 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 FUBP1Q96AE4 644 aaKnown RBP12.3□□□□□ -0.44
SNX17-208ENST00000493711 BMFQ96LC9 184 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 CCDC68Q9H2F9 335 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 FZD3Q9NPG1 666 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 MARCH4Q9P2E8 410 aaPredicted RBP12.3□□□□□ -0.44
SNX17-208ENST00000493711 SLC24A2Q9UI40 661 aa12.3□□□□□ -0.44
SNX17-208ENST00000493711 CNOT6Q9ULM6 557 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms