RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 RNF8O76064 485 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 UBXN7O94888 489 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 CLDN1O95832 211 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 RECKO95980 971 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 RARAP10276 462 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 ATP1A3P13637 1013 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 BRAFP15056 766 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 IL4RP24394 825 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 SPINT3P49223 89 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 NIPAL4Q0D2K0 466 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 IL10RAQ13651 578 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 IL11RAQ14626 422 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 CT47A1Q5JQC4 288 aaPredicted RBP13.03□□□□□ -0.32
USF1-206ENST00000491629 E4F1Q66K89 784 aaPredicted RBP13.03□□□□□ -0.32
USF1-206ENST00000491629 RASGRP3Q8IV61 690 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 AOPEPQ8N6M6 819 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 Q8NA96 180 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 LRRN4Q8WUT4 740 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 KLHL6Q8WZ60 621 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 LYSMD1Q96S90 227 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 OR2AG1Q9H205 316 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 HSD3B7Q9H2F3 369 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 ACTL8Q9H568 366 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 STN1Q9H668 368 aaKnown RBP13.03□□□□□ -0.32
USF1-206ENST00000491629 RMI1Q9H9A7 625 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 KLC4Q9NSK0 619 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 LIMA1Q9UHB6 759 aaKnown RBP13.03□□□□□ -0.32
USF1-206ENST00000491629 LNPEPQ9UIQ6 1025 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 KCND3Q9UK17 655 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 CROCCQ5TZA2 2017 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 ANKRD12Q6UB98 2062 aa13.03□□□□□ -0.32
USF1-206ENST00000491629 FBN2P35556 2912 aa13.02□□□□□ -0.32
USF1-206ENST00000491629 CSMD2Q7Z408 3487 aa13.02□□□□□ -0.32
USF1-206ENST00000491629 OR5K4A6NMS3 321 aa13.02□□□□□ -0.33
USF1-206ENST00000491629 TCP11X1B4DZS4 312 aa13.02□□□□□ -0.33
USF1-206ENST00000491629 TOX3O15405 576 aaPredicted RBP13.02□□□□□ -0.33
USF1-206ENST00000491629 PCK1P35558 622 aa13.02□□□□□ -0.33
USF1-206ENST00000491629 GARSP41250 739 aaKnown RBP13.02□□□□□ -0.33
USF1-206ENST00000491629 MRPL49Q13405 166 aaKnown RBP13.02□□□□□ -0.33
USF1-206ENST00000491629 EIF2S3LQ2VIR3 472 aaKnown RBP13.02□□□□□ -0.33
USF1-206ENST00000491629 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.02□□□□□ -0.33
USF1-206ENST00000491629 GLIPR1L2Q4G1C9 344 aa13.02□□□□□ -0.33
USF1-206ENST00000491629 PAPD7Q5XG87 772 aaKnown RBP13.02□□□□□ -0.33
USF1-206ENST00000491629 PWWP2BQ6NUJ5 590 aa13.02□□□□□ -0.33
USF1-206ENST00000491629 CERS6Q6ZMG9 384 aa13.02□□□□□ -0.33
USF1-206ENST00000491629 PRSS42Q7Z5A4 293 aa13.02□□□□□ -0.33
USF1-206ENST00000491629 RAVER1Q8IY67 606 aaKnown RBP13.02□□□□□ -0.33
USF1-206ENST00000491629 BBS5Q8N3I7 341 aa13.02□□□□□ -0.33
USF1-206ENST00000491629 EFCAB3Q8N7B9 438 aa13.02□□□□□ -0.33
USF1-206ENST00000491629 MAML1Q92585 1016 aa13.02□□□□□ -0.33
USF1-206ENST00000491629 HSPH1Q92598 858 aa13.02□□□□□ -0.33
USF1-206ENST00000491629 TCTN2Q96GX1 697 aa13.02□□□□□ -0.33
USF1-206ENST00000491629 BRD8Q9H0E9 1235 aa13.02□□□□□ -0.33
USF1-206ENST00000491629 CARD9Q9H257 536 aa13.02□□□□□ -0.33
USF1-206ENST00000491629 PCDH18Q9HCL0 1135 aa13.02□□□□□ -0.33
USF1-206ENST00000491629 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.02□□□□□ -0.33
USF1-206ENST00000491629 PADI1Q9ULC6 663 aa13.02□□□□□ -0.33
USF1-206ENST00000491629 DOCK10Q96BY6 2186 aa13.02□□□□□ -0.33
USF1-206ENST00000491629 ZGRF1Q86YA3 2104 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 IGHV5-51A0A0C4DH38 117 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 C1orf232A0A0U1RR37 186 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 WIPF3A6NGB9 483 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 LRRC10BA6NIK2 292 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 CHUKO15111 745 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 MFSD11O43934 449 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 FTLP02792 175 aaPredicted RBP13.01□□□□□ -0.33
USF1-206ENST00000491629 MMP2P08253 660 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 CD48P09326 243 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 SLC2A4P14672 509 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 FOLR1P15328 257 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 FERP16591 822 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 DESP17661 470 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 NELFEP18615 380 aaKnown RBP13.01□□□□□ -0.33
USF1-206ENST00000491629 DCTP40126 519 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 ARL4AP40617 200 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 CAPZBP47756 277 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 EPHB1P54762 984 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 UBXN1Q04323 297 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 ITKQ08881 620 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 MMRN1Q13201 1228 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 KCNAB1Q14722 419 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 QPCTQ16769 361 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 UGT8Q16880 541 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 PLA2G4EQ3MJ16 856 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 KHDC1Q4VXA5 237 aaKnown RBP13.01□□□□□ -0.33
USF1-206ENST00000491629 CACHD1Q5VU97 1274 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 FAM92BQ6ZTR7 304 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 ZNF571Q7Z3V5 609 aaPredicted RBP13.01□□□□□ -0.33
USF1-206ENST00000491629 ADGRG6Q86SQ4 1221 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 ZNF547Q8IVP9 402 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 LPCAT1Q8NF37 534 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 PCMTD1Q96MG8 357 aaPredicted RBP13.01□□□□□ -0.33
USF1-206ENST00000491629 POLR1EQ9GZS1 481 aaKnown RBP13.01□□□□□ -0.33
USF1-206ENST00000491629 NUP62CLQ9H1M0 184 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 OSGEPL1Q9H4B0 414 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 FAM83DQ9H4H8 585 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 SLC40A1Q9NP59 571 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 CUEDC1Q9NWM3 386 aaPredicted RBP13.01□□□□□ -0.33
USF1-206ENST00000491629 LUZP4Q9P127 313 aa13.01□□□□□ -0.33
USF1-206ENST00000491629 SEMA5BQ9P283 1151 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms