RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 MT-CO3P00414 261 aa15.2■□□□□ 0.02
VPS26A-207ENST00000490696 C1QTNF9P0C862 333 aa15.2■□□□□ 0.02
VPS26A-207ENST00000490696 GLB1P16278 677 aa15.2■□□□□ 0.02
VPS26A-207ENST00000490696 XIAPP98170 497 aa15.2■□□□□ 0.02
VPS26A-207ENST00000490696 CCDC173Q0VFZ6 552 aa15.2■□□□□ 0.02
VPS26A-207ENST00000490696 TARDBPQ13148 414 aaKnown RBP eCLIP15.2■□□□□ 0.02
VPS26A-207ENST00000490696 PEX6Q13608 980 aa15.2■□□□□ 0.02
VPS26A-207ENST00000490696 ITGA9Q13797 1035 aa15.2■□□□□ 0.02
VPS26A-207ENST00000490696 CHST15Q7LFX5 561 aaPredicted RBP15.2■□□□□ 0.02
VPS26A-207ENST00000490696 NAGSQ8N159 534 aa15.2■□□□□ 0.02
VPS26A-207ENST00000490696 DDHD1Q8NEL9 900 aa15.2■□□□□ 0.02
VPS26A-207ENST00000490696 OR52K1Q8NGK4 314 aa15.2■□□□□ 0.02
VPS26A-207ENST00000490696 CCDC74AQ96AQ1 378 aa15.2■□□□□ 0.02
VPS26A-207ENST00000490696 CCDC3Q9BQI4 270 aa15.2■□□□□ 0.02
VPS26A-207ENST00000490696 ABCG4Q9H172 646 aa15.2■□□□□ 0.02
VPS26A-207ENST00000490696 SNX12Q9UMY4 172 aa15.2■□□□□ 0.02
VPS26A-207ENST00000490696 CLCA2Q9UQC9 943 aa15.2■□□□□ 0.02
VPS26A-207ENST00000490696 E7EVH7 732 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 PGRMC1O00264 195 aaKnown RBP15.19■□□□□ 0.02
VPS26A-207ENST00000490696 CES2O00748 559 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 NUDT21O43809 227 aaKnown RBP15.19■□□□□ 0.02
VPS26A-207ENST00000490696 SRP72O76094 671 aaKnown RBP15.19■□□□□ 0.02
VPS26A-207ENST00000490696 CDK14O94921 469 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 ECEL1O95672 775 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 ACP5P13686 325 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 GRIA1P42261 906 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 MAZP56270 477 aaKnown RBP15.19■□□□□ 0.02
VPS26A-207ENST00000490696 TMEM115Q12893 351 aaPredicted RBP15.19■□□□□ 0.02
VPS26A-207ENST00000490696 CYP1B1Q16678 543 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 LDLRAP1Q5SW96 308 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 GPRC6AQ5T6X5 926 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 TTC27Q6P3X3 843 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 CRTC3Q6UUV7 619 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 C4orf22Q6V702 233 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 GSTA5Q7RTV2 222 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 ZNF547Q8IVP9 402 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 ARL14Q8N4G2 192 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 ZNF398Q8TD17 642 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 ACTRT1Q8TDG2 376 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 PATE1Q8WXA2 126 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 DNAJC1Q96KC8 554 aaKnown RBP15.19■□□□□ 0.02
VPS26A-207ENST00000490696 NAP1L3Q99457 506 aaPredicted RBP15.19■□□□□ 0.02
VPS26A-207ENST00000490696 AP1M1Q9BXS5 423 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 SMARCAL1Q9NZC9 954 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 APPL1Q9UKG1 709 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 KCNK6Q9Y257 313 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 RNF215Q9Y6U7 377 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 ASPMQ8IZT6 3477 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 MYLKQ15746 1914 aa15.19■□□□□ 0.02
VPS26A-207ENST00000490696 COL27A1Q8IZC6 1860 aaPredicted RBP15.18■□□□□ 0.02
VPS26A-207ENST00000490696 BPTFQ12830 3046 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 A6NCN8 305 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 MROH6A6NGR9 719 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 AGAP14A8MT82 685 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 CCL22O00626 93 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 NTN3O00634 580 aaPredicted RBP15.18■□□□□ 0.02
VPS26A-207ENST00000490696 EML2O95834 649 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 APRTP07741 180 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 PNLIPP16233 465 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 PSMA3P25788 255 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 HADHAP40939 763 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 LMAN1P49257 510 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 CLCNKAP51800 687 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 TMPRSS15P98073 1019 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 CDH17Q12864 832 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 NFATC2Q13469 925 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 POU6F1Q14863 301 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 KCTD19Q17RG1 926 aaPredicted RBP15.18■□□□□ 0.02
VPS26A-207ENST00000490696 ZNF438Q7Z4V0 828 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 LRRTM4Q86VH4 590 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 GDAP1Q8TB36 358 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 MAGOHBQ96A72 148 aaKnown RBP15.18■□□□□ 0.02
VPS26A-207ENST00000490696 CASS4Q9NQ75 786 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 EIF2B3Q9NR50 452 aaKnown RBP15.18■□□□□ 0.02
VPS26A-207ENST00000490696 NLE1Q9NVX2 485 aaPredicted RBP15.18■□□□□ 0.02
VPS26A-207ENST00000490696 LRIT1Q9P2V4 623 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 TBC1D29Q9UFV1 150 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 SLC23A2Q9UGH3 650 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 FREM2Q5SZK8 3169 aa15.18■□□□□ 0.02
VPS26A-207ENST00000490696 UNC13CQ8NB66 2214 aa15.17■□□□□ 0.02
VPS26A-207ENST00000490696 TRABD2BA6NFA1 517 aa15.17■□□□□ 0.02
VPS26A-207ENST00000490696 PRR19A6NJB7 356 aa15.17■□□□□ 0.02
VPS26A-207ENST00000490696 H7C0S8 307 aa15.17■□□□□ 0.02
VPS26A-207ENST00000490696 KMOO15229 486 aa15.17■□□□□ 0.02
VPS26A-207ENST00000490696 ZNF185O15231 689 aa15.17■□□□□ 0.02
VPS26A-207ENST00000490696 TCEA3O75764 348 aa15.17■□□□□ 0.02
VPS26A-207ENST00000490696 CAPNS1P04632 268 aa15.17■□□□□ 0.02
VPS26A-207ENST00000490696 PROS1P07225 676 aa15.17■□□□□ 0.02
VPS26A-207ENST00000490696 ZNF7P17097 686 aaPredicted RBP15.17■□□□□ 0.02
VPS26A-207ENST00000490696 GNG11P61952 73 aa15.17■□□□□ 0.02
VPS26A-207ENST00000490696 SEPT6Q14141 434 aa15.17■□□□□ 0.02
VPS26A-207ENST00000490696 NR1D2Q14995 579 aa15.17■□□□□ 0.02
VPS26A-207ENST00000490696 PPP1R21Q6ZMI0 780 aa15.17■□□□□ 0.02
VPS26A-207ENST00000490696 C11orf96Q7Z7L8 435 aa15.17■□□□□ 0.02
VPS26A-207ENST00000490696 RASGEF1AQ8N9B8 481 aa15.17■□□□□ 0.02
VPS26A-207ENST00000490696 DNAAF3Q8N9W5 541 aa15.17■□□□□ 0.02
VPS26A-207ENST00000490696 WDR48Q8TAF3 677 aa15.17■□□□□ 0.02
VPS26A-207ENST00000490696 STYXQ8WUJ0 223 aa15.17■□□□□ 0.02
VPS26A-207ENST00000490696 DEPDC7Q96QD5 511 aa15.17■□□□□ 0.02
VPS26A-207ENST00000490696 TIMM29Q9BSF4 260 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms