RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ARCQ7LC44 396 aa13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 GALNT16Q8N428 558 aa13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 AVL9Q8NBF6 648 aa13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 CCDC120Q96HB5 630 aa13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 TMUB1Q9BVT8 246 aa13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 PDCL3Q9H2J4 239 aa13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 RMND1Q9NWS8 449 aa13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 ZNF624Q9P2J8 865 aaPredicted RBP13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 NOVA2Q9UNW9 492 aaKnown RBP13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 SIK3Q9Y2K2 1263 aa13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.45□□□□□ -0.26
EXOSC3-207ENST00000490516 KCNN4O15554 427 aa13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 HTRA2O43464 458 aaPredicted RBP13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 ZNF202O95125 648 aa13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 KLK3P07288 261 aaPredicted RBP13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 CAPN1P07384 714 aa13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 SDC4P31431 198 aa13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 PAPOLAP51003 745 aaKnown RBP13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 KCNK10P57789 538 aa13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 AP1S1P61966 158 aa13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 ACY1Q03154 408 aa13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 HIF1AQ16665 826 aa13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 PLEKHS1Q5SXH7 462 aa13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 BPHLQ86WA6 291 aaPredicted RBP13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 TRIM48Q8IWZ4 208 aa13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 JOSD2Q8TAC2 188 aa13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 TM9SF4Q92544 642 aa13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 SPOCK2Q92563 424 aa13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 HDAC11Q96DB2 347 aa13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 SMIM14Q96QK8 99 aa13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 SLC39A8Q9C0K1 460 aa13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 OSGEPL1Q9H4B0 414 aa13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 VPS18Q9P253 973 aa13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 APEX2Q9UBZ4 518 aa13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 CACNA1CQ13936 2221 aa13.44□□□□□ -0.26
EXOSC3-207ENST00000490516 ACANP16112 2415 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 C19orf84I3L1E1 186 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 MEN1O00255 615 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 FOXN3O00409 490 aaPredicted RBP13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 FAM155BO75949 473 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 CD44P16070 742 aaKnown RBP13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 CTPS1P17812 591 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 OTX2P32243 289 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 GPR18Q14330 331 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 GPR19Q15760 415 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 FAM198BQ6UWH4 519 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 SPOCD1Q6ZMY3 1216 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 ARHGAP36Q6ZRI8 547 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 STRADAQ7RTN6 431 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 CNTRLQ7Z7A1 2325 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 SLFN11Q7Z7L1 901 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 PHYKPLQ8IUZ5 450 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 DSELQ8IZU8 1212 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 ZNF808Q8N4W9 903 aaPredicted RBP13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 CLEC1AQ8NC01 280 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 EXD1Q8NHP7 514 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 FAM172AQ8WUF8 416 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 CPA5Q8WXQ8 436 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 UBXN4Q92575 508 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 CENPIQ92674 756 aaPredicted RBP13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 SNX21Q969T3 373 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 NTAN1Q96AB6 310 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 SCRN2Q96FV2 425 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 FAM81BQ96LP2 452 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 SLX1AQ9BQ83 275 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 WDR77Q9BQA1 342 aaPredicted RBP13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 RIOK2Q9BVS4 552 aaKnown RBP13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 CATSPERBQ9H7T0 1116 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 KLC4Q9NSK0 619 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 SEMA5BQ9P283 1151 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 EPHA6Q9UF33 1036 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 NEU2Q9Y3R4 380 aa13.43□□□□□ -0.26
EXOSC3-207ENST00000490516 PCM1Q15154 2024 aa13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 NUP210LQ5VU65 1888 aa13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 A0A1W2PQJ5 194 aa13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 PSMA7O14818 248 aa13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 JRKO75564 520 aa13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 IPO13O94829 963 aaKnown RBP13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 JCHAINP01591 159 aa13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 ART1P52961 327 aa13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 GSDMDP57764 484 aa13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 TRAF2Q12933 501 aa13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 PKP1Q13835 747 aa13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 SEPT7Q16181 437 aaKnown RBP13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 DCAF10Q5QP82 559 aa13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 TAF3Q5VWG9 929 aa13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 LRRC66Q68CR7 880 aa13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 ISM2Q6H9L7 571 aa13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 TTI2Q6NXR4 508 aa13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 MRGPREQ86SM8 312 aa13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 RAB43Q86YS6 212 aa13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 TTC30BQ8N4P2 665 aa13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 MCCC1Q96RQ3 725 aaPredicted RBP13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 MAP3K3Q99759 626 aa13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 KCND1Q9NSA2 647 aa13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 SUCOQ9UBS9 1254 aaKnown RBP13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 CNOT6Q9ULM6 557 aaKnown RBP13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 SEC16AO15027 2179 aa13.42□□□□□ -0.26
EXOSC3-207ENST00000490516 MAP1AP78559 2803 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms