RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 CAPN1P07384 714 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 ELFN1P0C7U0 828 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 TSFMP43897 325 aaKnown RBP7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 RRADP55042 308 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 CDK3Q00526 305 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 FOXD4Q12950 439 aaPredicted RBP7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 GPS2Q13227 327 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 ATP1A4Q13733 1029 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 MYBPC3Q14896 1274 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 SKOR2Q2VWA4 1001 aaPredicted RBP7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 BRAT1Q6PJG6 821 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 OLFML1Q6UWY5 402 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 RPTNQ6XPR3 784 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 DPPA4Q7L190 304 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 TAOK1Q7L7X3 1001 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 PRSS42Q7Z5A4 293 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 NLRP14Q86W24 1093 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 WDTC1Q8N5D0 677 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 KLHL6Q8WZ60 621 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 NT5C3BQ969T7 300 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 ECHDC3Q96DC8 303 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 PGAP3Q96FM1 320 aaPredicted RBP7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 TMX3Q96JJ7 454 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 EXOC2Q96KP1 924 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 COQ10AQ96MF6 247 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 FCRL4Q96PJ5 515 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 TRAPPC9Q96Q05 1148 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 CPXM1Q96SM3 734 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 TREX2Q9BQ50 279 aaPredicted RBP7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 KRTAP17-1Q9BYP8 105 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 WDCPQ9H6R7 721 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 PPARGC1AQ9UBK2 798 aaKnown RBP7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 AJAP1Q9UKB5 411 aaPredicted RBP7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 TCFL5Q9UL49 500 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 NOVA2Q9UNW9 492 aaKnown RBP7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 NEU3Q9UQ49 428 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 PCDHGB6Q9Y5F9 930 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 PCYT1BQ9Y5K3 369 aaPredicted RBP7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 PKD1L1Q8TDX9 2849 aa7.02□□□□□ -1.29
PDLIM1-203ENST00000490391 MEGF8Q7Z7M0 2845 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 A0A0U1RQS6 177 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 STX10O60499 249 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 ALPPP05187 535 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 FOSL1P15407 271 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 NELFEP18615 380 aaKnown RBP7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 TEAD1P28347 426 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 DNAJA1P31689 397 aaKnown RBP7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 ETFBP38117 255 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 TDGF1P3P51864 188 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 KCNK10P57789 538 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 RHOAP61586 193 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 UBE2IP63279 158 aaKnown RBP7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 OTUD4Q01804 1114 aaKnown RBP7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 Q0VFX4 171 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 PYCR3Q53H96 274 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 INO80DQ53TQ3 878 aaPredicted RBP7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 OXLD1Q5BKU9 147 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 ACBD5Q5T8D3 534 aaPredicted RBP7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 MANEALQ5VSG8 457 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 HGSNATQ68CP4 663 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 ZNF324BQ6AW86 544 aaPredicted RBP7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 PLEKHA7Q6IQ23 1121 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 LCN10Q6JVE6 187 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 IYDQ6PHW0 289 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 SPOCD1Q6ZMY3 1216 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 FAM183BPQ6ZVS7 135 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 ZNF765Q7L2R6 523 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 SLC26A9Q7LBE3 791 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 CAMK1DQ8IU85 385 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 GALNT16Q8N428 558 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 ENDOVQ8N8Q3 282 aaKnown RBP7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 SLC38A9Q8NBW4 561 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 LINC00301Q8NCQ3 95 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 SH3KBP1Q96B97 665 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 INTS4Q96HW7 963 aaKnown RBP7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 AGAP3Q96P47 875 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 TGM7Q96PF1 710 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 FOXC2Q99958 501 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 KLC2Q9H0B6 622 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 ENKD1Q9H0I2 346 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 CHST8Q9H2A9 424 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 NEUROD4Q9HD90 331 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 SEMA3GQ9NS98 782 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 EXOC1Q9NV70 894 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 PPP4R2Q9NY27 417 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 SEMA5BQ9P283 1151 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 TBC1D29Q9UFV1 150 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 SNX7Q9UNH6 387 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 CNTN6Q9UQ52 1028 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 GPC6Q9Y625 555 aaPredicted RBP7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 SLC30A1Q9Y6M5 507 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 TGP01266 2768 aa7.01□□□□□ -1.29
PDLIM1-203ENST00000490391 ANKRD12Q6UB98 2062 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 CCDC88CQ9P219 2028 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 PCDH17O14917 1159 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 KDELR3O43731 214 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 CPNE3O75131 537 aaKnown RBP7□□□□□ -1.29
PDLIM1-203ENST00000490391 JRKO75564 520 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 SOD1P00441 154 aa7□□□□□ -1.29
PDLIM1-203ENST00000490391 RAB40ALP0C0E4 278 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms