RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 CSH2P0DML3 217 aa8.21□□□□□ -1.1
MCF2L2-212ENST00000488149 HNRNPCL4P0DMR1 293 aa8.21□□□□□ -1.1
MCF2L2-212ENST00000488149 TIGD6Q17RP2 521 aa8.21□□□□□ -1.1
MCF2L2-212ENST00000488149 PABPC1LQ4VXU2 614 aaKnown RBP8.21□□□□□ -1.1
MCF2L2-212ENST00000488149 COLEC12Q5KU26 742 aa8.21□□□□□ -1.1
MCF2L2-212ENST00000488149 RPTNQ6XPR3 784 aa8.21□□□□□ -1.1
MCF2L2-212ENST00000488149 LRRC52Q8N7C0 313 aa8.21□□□□□ -1.1
MCF2L2-212ENST00000488149 CNPPD1Q9BV87 410 aa8.21□□□□□ -1.1
MCF2L2-212ENST00000488149 EIF2B3Q9NR50 452 aaKnown RBP8.21□□□□□ -1.1
MCF2L2-212ENST00000488149 MED11Q9P086 117 aa8.21□□□□□ -1.1
MCF2L2-212ENST00000488149 GOLGA4Q13439 2230 aaKnown RBP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 MOXD2PA6NHM9 499 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 AQP1P29972 269 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 PCBP1Q15365 356 aaKnown RBP eCLIP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 GPR158Q5T848 1215 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 PPP1R26Q5T8A7 1209 aaPredicted RBP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 LCLAT1Q6UWP7 414 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 TRAPPC5Q8IUR0 188 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 CENPSQ8N2Z9 138 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 C9orf43Q8TAL5 461 aaPredicted RBP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 HEXDCQ8WVB3 486 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 DNAJB3Q8WWF6 145 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 RFKQ969G6 155 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 C12orf43Q96C57 262 aaKnown RBP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 PCDHAC1Q9H158 963 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 TIMM22Q9Y584 194 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 NPEPPSL1A6NEC2 478 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 YDJCA8MPS7 323 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 PSKH1P11801 424 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 NCK1P16333 377 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 XRCC1P18887 633 aaPredicted RBP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 MAGEA8P43361 318 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 SLC15A1P46059 708 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 MAZP56270 477 aaKnown RBP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 SH3D19Q5HYK7 790 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 ZNF613Q6PF04 617 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 OAFQ86UD1 273 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 C12orf29Q8N999 325 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 GLB1L3Q8NCI6 653 aaPredicted RBP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 ERLEC1Q96DZ1 483 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 TRNT1Q96Q11 434 aaKnown RBP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 MRPL45Q9BRJ2 306 aaKnown RBP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 LRRC3Q9BY71 257 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 DCSTAMPQ9H295 470 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 NOCTQ9UK39 431 aaKnown RBP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 MKLN1Q9UL63 735 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 OAZ3Q9UMX2 235 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 MRPL42Q9Y6G3 142 aaKnown RBP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 J3QRK9 145 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 CXCR6O00574 342 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 MAFO75444 373 aaPredicted RBP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 RPP40O75818 363 aaKnown RBP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 CCR4P51679 360 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 MAXP61244 160 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 CAPSQ13938 189 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 RNF180Q86T96 592 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 FSTL5Q8N475 847 aaPredicted RBP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 CSGALNACT1Q8TDX6 532 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 CLP1Q92989 425 aaKnown RBP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 FBXL8Q96CD0 374 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 ACSS2Q9NR19 701 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 INTS7Q9NVH2 962 aaKnown RBP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 FKBP14Q9NWM8 211 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 SPATA31D1Q6ZQQ2 1576 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 OR6C70A6NIJ9 312 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 NUDT14O95848 222 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 IFNW1P05000 195 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 URODP06132 367 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 ATP5C1P36542 298 aaKnown RBP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 MXD1Q05195 221 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 TAF13Q15543 124 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 ZNHIT3Q15649 155 aaPredicted RBP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 RAP1GAP2Q684P5 730 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 ZNF517Q6ZMY9 492 aaPredicted RBP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 USP30Q70CQ3 517 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 RNF44Q7L0R7 432 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 SLC22A16Q86VW1 577 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 OR10A6Q8NH74 314 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 CLHC1Q8NHS4 586 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 NUSAP1Q9BXS6 441 aaKnown RBP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 RNF38Q9H0F5 515 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 SEC14L3Q9UDX4 400 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 TBC1D24Q9ULP9 559 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 PCDHB1Q9Y5F3 818 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 SPATA31A1Q5TZJ5 1347 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 TP73O15350 636 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 LINGO3P0C6S8 592 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 PIRTP0C851 137 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 CDH1P12830 882 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 MC4RP32245 332 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 CDH15P55291 814 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 DCLRE1AQ6PJP8 1040 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 SAMD7Q7Z3H4 446 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 SPAG16Q8N0X2 631 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 DNAJB8Q8NHS0 232 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 DUSP16Q9BY84 665 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 ARHGAP23Q9P227 1491 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 DISP2A7MBM2 1401 aa8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 PABPC4LP0CB38 370 aaKnown RBP8.2□□□□□ -1.1
MCF2L2-212ENST00000488149 COL6A1P12109 1028 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms