RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 TRIM48Q8IWZ4 208 aa14.99□□□□□ -0.01
NME1-208ENST00000487481 RAVER1Q8IY67 606 aaKnown RBP14.99□□□□□ -0.01
NME1-208ENST00000487481 BBS5Q8N3I7 341 aa14.99□□□□□ -0.01
NME1-208ENST00000487481 PGBD5Q8N414 524 aa14.99□□□□□ -0.01
NME1-208ENST00000487481 PIH1D2Q8WWB5 315 aa14.99□□□□□ -0.01
NME1-208ENST00000487481 SMAD5Q99717 465 aaKnown RBP14.99□□□□□ -0.01
NME1-208ENST00000487481 TUBGCP2Q9BSJ2 902 aa14.99□□□□□ -0.01
NME1-208ENST00000487481 VPS16Q9H269 839 aa14.99□□□□□ -0.01
NME1-208ENST00000487481 AKIRIN1Q9H9L7 192 aaPredicted RBP14.99□□□□□ -0.01
NME1-208ENST00000487481 ASF1BQ9NVP2 202 aa14.99□□□□□ -0.01
NME1-208ENST00000487481 GPR83Q9NYM4 423 aa14.99□□□□□ -0.01
NME1-208ENST00000487481 EPHA6Q9UF33 1036 aa14.99□□□□□ -0.01
NME1-208ENST00000487481 DNPEPQ9ULA0 475 aa14.99□□□□□ -0.01
NME1-208ENST00000487481 CNOT6Q9ULM6 557 aaKnown RBP14.99□□□□□ -0.01
NME1-208ENST00000487481 FARSAQ9Y285 508 aaKnown RBP14.99□□□□□ -0.01
NME1-208ENST00000487481 ARHGAP10A1A4S6 786 aa14.98□□□□□ -0.01
NME1-208ENST00000487481 GRID2O43424 1007 aa14.98□□□□□ -0.01
NME1-208ENST00000487481 KIF1CO43896 1103 aaKnown RBP14.98□□□□□ -0.01
NME1-208ENST00000487481 TMEM63AO94886 807 aa14.98□□□□□ -0.01
NME1-208ENST00000487481 PEX11BO96011 259 aa14.98□□□□□ -0.01
NME1-208ENST00000487481 RPL7AP62424 266 aaKnown RBP14.98□□□□□ -0.01
NME1-208ENST00000487481 CA9Q16790 459 aa14.98□□□□□ -0.01
NME1-208ENST00000487481 TPD52L1Q16890 204 aaPredicted RBP14.98□□□□□ -0.01
NME1-208ENST00000487481 FAM199XQ6PEV8 388 aaPredicted RBP14.98□□□□□ -0.01
NME1-208ENST00000487481 FAM92BQ6ZTR7 304 aa14.98□□□□□ -0.01
NME1-208ENST00000487481 MON1BQ7L1V2 547 aa14.98□□□□□ -0.01
NME1-208ENST00000487481 AOPEPQ8N6M6 819 aa14.98□□□□□ -0.01
NME1-208ENST00000487481 ADAMTS17Q8TE56 1095 aa14.98□□□□□ -0.01
NME1-208ENST00000487481 RSC1A1Q92681 617 aa14.98□□□□□ -0.01
NME1-208ENST00000487481 CARD9Q9H257 536 aa14.98□□□□□ -0.01
NME1-208ENST00000487481 OSGEPL1Q9H4B0 414 aa14.98□□□□□ -0.01
NME1-208ENST00000487481 POT1Q9NUX5 634 aa14.98□□□□□ -0.01
NME1-208ENST00000487481 PDZD2O15018 2839 aa14.97□□□□□ -0.01
NME1-208ENST00000487481 NUAK1O60285 661 aa14.97□□□□□ -0.01
NME1-208ENST00000487481 CPNE3O75131 537 aaKnown RBP14.97□□□□□ -0.01
NME1-208ENST00000487481 SLC19A1P41440 591 aa14.97□□□□□ -0.01
NME1-208ENST00000487481 MAXP61244 160 aa14.97□□□□□ -0.01
NME1-208ENST00000487481 ACY1Q03154 408 aa14.97□□□□□ -0.01
NME1-208ENST00000487481 CLEC16AQ2KHT3 1053 aa14.97□□□□□ -0.01
NME1-208ENST00000487481 PPP1R15BQ5SWA1 713 aa14.97□□□□□ -0.01
NME1-208ENST00000487481 IZUMO3Q5VZ72 239 aa14.97□□□□□ -0.01
NME1-208ENST00000487481 IRGCQ6NXR0 463 aa14.97□□□□□ -0.01
NME1-208ENST00000487481 ZNF517Q6ZMY9 492 aaPredicted RBP14.97□□□□□ -0.01
NME1-208ENST00000487481 ZC3H18Q86VM9 953 aaKnown RBP14.97□□□□□ -0.01
NME1-208ENST00000487481 TMEM102Q8N9M5 508 aaPredicted RBP14.97□□□□□ -0.01
NME1-208ENST00000487481 GLIS1Q8NBF1 620 aa14.97□□□□□ -0.01
NME1-208ENST00000487481 SIDT2Q8NBJ9 832 aaKnown RBP14.97□□□□□ -0.01
NME1-208ENST00000487481 UBXN4Q92575 508 aa14.97□□□□□ -0.01
NME1-208ENST00000487481 SLC41A2Q96JW4 573 aa14.97□□□□□ -0.01
NME1-208ENST00000487481 RANBP9Q96S59 729 aa14.97□□□□□ -0.01
NME1-208ENST00000487481 KCTD15Q96SI1 283 aaPredicted RBP14.97□□□□□ -0.01
NME1-208ENST00000487481 PCDHB18PQ96TA0 734 aa14.97□□□□□ -0.01
NME1-208ENST00000487481 UNKQ9C0B0 810 aaKnown RBP14.97□□□□□ -0.01
NME1-208ENST00000487481 RAB33BQ9H082 229 aa14.97□□□□□ -0.01
NME1-208ENST00000487481 SCHIP1Q9P0W5 487 aaPredicted RBP14.97□□□□□ -0.01
NME1-208ENST00000487481 SEMA5BQ9P283 1151 aa14.97□□□□□ -0.01
NME1-208ENST00000487481 C5AR2Q9P296 337 aa14.97□□□□□ -0.01
NME1-208ENST00000487481 HIVEP1P15822 2718 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 A0A0J9YYE9 177 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 PES1O00541 588 aaKnown RBP14.96□□□□□ -0.01
NME1-208ENST00000487481 ZNF185O15231 689 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 FZD6O60353 706 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 TRBC1P01850 177 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 PDHA1P08559 390 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 FOLR1P15328 257 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 SOX5P35711 763 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 ZNF135P52742 658 aaPredicted RBP14.96□□□□□ -0.01
NME1-208ENST00000487481 PER3P56645 1201 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 CDK18Q07002 472 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 KRTAP21-3Q3LHN1 58 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 ERMARDQ5T6L9 678 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 HENMT1Q5T8I9 393 aaKnown RBP14.96□□□□□ -0.01
NME1-208ENST00000487481 VWA5B1Q5TIE3 1220 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 DCUN1D2Q6PH85 259 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 MED25Q71SY5 747 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 RBM12BQ8IXT5 1001 aaKnown RBP14.96□□□□□ -0.01
NME1-208ENST00000487481 CISD2Q8N5K1 135 aaKnown RBP14.96□□□□□ -0.01
NME1-208ENST00000487481 MR1Q95460 341 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 ZNF514Q96K75 400 aaPredicted RBP14.96□□□□□ -0.01
NME1-208ENST00000487481 SNRNP25Q9BV90 132 aaKnown RBP14.96□□□□□ -0.01
NME1-208ENST00000487481 GANQ9H2C0 597 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 RUBCNLQ9H714 662 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 WASH6PQ9NQA3 447 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 KLC4Q9NSK0 619 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 TMEM63CQ9P1W3 806 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 ZNF624Q9P2J8 865 aaPredicted RBP14.96□□□□□ -0.01
NME1-208ENST00000487481 SNX7Q9UNH6 387 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 B3GNT3Q9Y2A9 372 aa14.96□□□□□ -0.01
NME1-208ENST00000487481 A6NL46 340 aa14.95□□□□□ -0.02
NME1-208ENST00000487481 FADS2P1A8MWK0 482 aa14.95□□□□□ -0.02
NME1-208ENST00000487481 MTA2O94776 668 aa14.95□□□□□ -0.02
NME1-208ENST00000487481 MMP13P45452 471 aa14.95□□□□□ -0.02
NME1-208ENST00000487481 VAV2P52735 878 aa14.95□□□□□ -0.02
NME1-208ENST00000487481 EPHB1P54762 984 aa14.95□□□□□ -0.02
NME1-208ENST00000487481 RRADP55042 308 aa14.95□□□□□ -0.02
NME1-208ENST00000487481 OGDHQ02218 1023 aa14.95□□□□□ -0.02
NME1-208ENST00000487481 DPYSQ14117 519 aa14.95□□□□□ -0.02
NME1-208ENST00000487481 KCNAB1Q14722 419 aa14.95□□□□□ -0.02
NME1-208ENST00000487481 PLEKHN1Q494U1 663 aaPredicted RBP14.95□□□□□ -0.02
NME1-208ENST00000487481 PPP6R3Q5H9R7 873 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms