RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 ERCC6Q03468 1493 aa3.98□□□□□ -1.77
LINC00888-204ENST00000487386 PRAG1Q86YV5 1406 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 KANSL1LA0AUZ9 987 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 LINC01565O15544 149 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 MBD4O95243 580 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 POLR2CP19387 275 aaPredicted RBP3.97□□□□□ -1.77
LINC00888-204ENST00000487386 ACADLP28330 430 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 TIMP3P35625 211 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 ARCN1P48444 511 aaKnown RBP3.97□□□□□ -1.77
LINC00888-204ENST00000487386 KRTAP10-6P60371 365 aaPredicted RBP3.97□□□□□ -1.77
LINC00888-204ENST00000487386 RPL24P83731 157 aaKnown RBP3.97□□□□□ -1.77
LINC00888-204ENST00000487386 GAGE5Q13069 117 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 GAGE6Q13070 117 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 RAB6CQ53S08 254 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 PMS2CLQ68D20 193 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 OR7E24Q6IFN5 339 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 FAM171BQ6P995 826 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 RAD9BQ6WBX8 426 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 Q75L30 129 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 SDCCAG8Q86SQ7 713 aaPredicted RBP3.97□□□□□ -1.77
LINC00888-204ENST00000487386 CERS3Q8IU89 383 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 SLC38A9Q8NBW4 561 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 DMBX1Q8NFW5 382 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 HM13Q8TCT9 377 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 TRPC4APQ8TEL6 797 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 RAB6CQ9H0N0 254 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 OLA1Q9NTK5 396 aaKnown RBP3.97□□□□□ -1.77
LINC00888-204ENST00000487386 STK39Q9UEW8 545 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 FGD5Q6ZNL6 1462 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 PBRM1Q86U86 1689 aa3.97□□□□□ -1.77
LINC00888-204ENST00000487386 PRR23AA6NEV1 266 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 C5orf60A6NFR6 353 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 ERVV-2B6SEH9 535 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 USO1O60763 962 aaKnown RBP3.96□□□□□ -1.78
LINC00888-204ENST00000487386 RNASEH2AO75792 299 aaKnown RBP3.96□□□□□ -1.78
LINC00888-204ENST00000487386 KCNK5O95279 499 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 GM2AP17900 193 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 NR1D1P20393 614 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 TCEA1P23193 301 aaKnown RBP3.96□□□□□ -1.78
LINC00888-204ENST00000487386 NFKBIAP25963 317 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 PHEXP78562 749 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 COG7P83436 770 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 TFAP4Q01664 338 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 SREBF2Q12772 1141 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 CDC16Q13042 620 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 NAB2Q15742 525 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 JADE1Q6IE81 842 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 KCTD8Q6ZWB6 473 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 HACE1Q8IYU2 909 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 RASGEF1CQ8N431 466 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 NGEFQ8N5V2 710 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 HJURPQ8NCD3 748 aaPredicted RBP3.96□□□□□ -1.78
LINC00888-204ENST00000487386 SLC24A4Q8NFF2 622 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 TMEM255BQ8WV15 326 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 UCMAQ8WVF2 138 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 C1orf74Q96LT6 269 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 POLR3CQ9BUI4 534 aaPredicted RBP3.96□□□□□ -1.78
LINC00888-204ENST00000487386 ITPAQ9BY32 194 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 TMEM39BQ9GZU3 492 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 ZNF334Q9HCZ1 680 aaPredicted RBP3.96□□□□□ -1.78
LINC00888-204ENST00000487386 RRP7BPQ9NSQ0 103 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 TCP11L1Q9NUJ3 509 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 HCFC1R1Q9NWW0 138 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 MDFICQ9P1T7 246 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 KLHL9Q9P2J3 617 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 POLG2Q9UHN1 485 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 MRC2Q9UBG0 1479 aa3.96□□□□□ -1.78
LINC00888-204ENST00000487386 WDR62O43379 1518 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 TOPBP1Q92547 1522 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 KIF21BO75037 1637 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 ABCA5Q8WWZ7 1642 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 EIF4G3O43432 1585 aaKnown RBP3.95□□□□□ -1.78
LINC00888-204ENST00000487386 OR5K3A6NET4 321 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 EIF4E1BA6NMX2 242 aaKnown RBP3.95□□□□□ -1.78
LINC00888-204ENST00000487386 A8MZ25 164 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 MAP2K7O14733 419 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 EIF3DO15371 548 aaKnown RBP eCLIP3.95□□□□□ -1.78
LINC00888-204ENST00000487386 SYNGR3O43761 229 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 WISP2O76076 250 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 SCGB1D1O95968 90 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 IGHV4-39P01824 125 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 PAX1P15863 534 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 ZNF23P17027 643 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 GLIPR1P48060 266 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 HOXA1P49639 335 aaPredicted RBP3.95□□□□□ -1.78
LINC00888-204ENST00000487386 TERF1P54274 439 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 DDX10Q13206 875 aaKnown RBP3.95□□□□□ -1.78
LINC00888-204ENST00000487386 PDE1CQ14123 709 aaPredicted RBP3.95□□□□□ -1.78
LINC00888-204ENST00000487386 EIF4A2Q14240 407 aaKnown RBP3.95□□□□□ -1.78
LINC00888-204ENST00000487386 KRT32Q14532 448 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 PDSS1Q5T2R2 415 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 HAUS3Q68CZ6 603 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 SARM1Q6SZW1 724 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 TRMT1LQ7Z2T5 733 aaKnown RBP3.95□□□□□ -1.78
LINC00888-204ENST00000487386 PPHLN1Q8NEY8 458 aaKnown RBP3.95□□□□□ -1.78
LINC00888-204ENST00000487386 OR8K5Q8NH50 307 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 OR52I2Q8NH67 350 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 HDAC2Q92769 488 aaKnown RBP3.95□□□□□ -1.78
LINC00888-204ENST00000487386 ALG14Q96F25 216 aa3.95□□□□□ -1.78
LINC00888-204ENST00000487386 SCRN2Q96FV2 425 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms