RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 JUPP14923 745 aa17.78■□□□□ 0.44
HDAC6-225ENST00000483506 CA5AP35218 305 aa17.78■□□□□ 0.44
HDAC6-225ENST00000483506 HADHAP40939 763 aa17.78■□□□□ 0.44
HDAC6-225ENST00000483506 KCNJ1P48048 391 aa17.78■□□□□ 0.44
HDAC6-225ENST00000483506 TMEM115Q12893 351 aaPredicted RBP17.78■□□□□ 0.44
HDAC6-225ENST00000483506 NR1D2Q14995 579 aa17.78■□□□□ 0.44
HDAC6-225ENST00000483506 ZNF547Q8IVP9 402 aa17.78■□□□□ 0.44
HDAC6-225ENST00000483506 TAB3Q8N5C8 712 aaPredicted RBP17.78■□□□□ 0.44
HDAC6-225ENST00000483506 OR13C4Q8NGS5 318 aa17.78■□□□□ 0.44
HDAC6-225ENST00000483506 ZNF398Q8TD17 642 aa17.78■□□□□ 0.44
HDAC6-225ENST00000483506 COG1Q8WTW3 980 aa17.78■□□□□ 0.44
HDAC6-225ENST00000483506 CCDC74AQ96AQ1 378 aa17.78■□□□□ 0.44
HDAC6-225ENST00000483506 MS4A14Q96JA4 679 aa17.78■□□□□ 0.44
HDAC6-225ENST00000483506 TIMM29Q9BSF4 260 aa17.78■□□□□ 0.44
HDAC6-225ENST00000483506 NLE1Q9NVX2 485 aaPredicted RBP17.78■□□□□ 0.44
HDAC6-225ENST00000483506 FKBPLQ9UIM3 349 aa17.78■□□□□ 0.44
HDAC6-225ENST00000483506 RABGEF1Q9UJ41 708 aa17.78■□□□□ 0.44
HDAC6-225ENST00000483506 PRKAB1Q9Y478 270 aa17.78■□□□□ 0.44
HDAC6-225ENST00000483506 USP24Q9UPU5 2620 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 C1QTNF9BB2RNN3 333 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 KMOO15229 486 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 GPR39O43194 453 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 UGT1A9O60656 530 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 MTX2O75431 263 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 SRP72O76094 671 aaKnown RBP17.77■□□□□ 0.44
HDAC6-225ENST00000483506 PROS1P07225 676 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 C1QTNF9P0C862 333 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 UGT1A6P19224 532 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 UGT1A1P22309 533 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 UGT1A4P22310 534 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 UGT1A3P35503 534 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 UGT1A5P35504 534 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 TARDBPQ13148 414 aaKnown RBP eCLIP17.77■□□□□ 0.44
HDAC6-225ENST00000483506 NFATC2Q13469 925 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 GPRC6AQ5T6X5 926 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 CHST15Q7LFX5 561 aaPredicted RBP17.77■□□□□ 0.44
HDAC6-225ENST00000483506 C11orf96Q7Z7L8 435 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 LRRTM4Q86VH4 590 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 MARCH9Q86YJ5 346 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 ARL14Q8N4G2 192 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 KDF1Q8NAX2 398 aaPredicted RBP17.77■□□□□ 0.44
HDAC6-225ENST00000483506 OR52K1Q8NGK4 314 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 ZCCHC2Q9C0B9 1178 aaKnown RBP17.77■□□□□ 0.44
HDAC6-225ENST00000483506 ABCG4Q9H172 646 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 UGT1A7Q9HAW7 530 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 UGT1A10Q9HAW8 530 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 UGT1A8Q9HAW9 530 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 CASS4Q9NQ75 786 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 KCND1Q9NSA2 647 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 RIMKLBQ9ULI2 386 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 RNF215Q9Y6U7 377 aa17.77■□□□□ 0.44
HDAC6-225ENST00000483506 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.76■□□□□ 0.43
HDAC6-225ENST00000483506 E7EVH7 732 aa17.76■□□□□ 0.43
HDAC6-225ENST00000483506 CDK14O94921 469 aa17.76■□□□□ 0.43
HDAC6-225ENST00000483506 ECEL1O95672 775 aa17.76■□□□□ 0.43
HDAC6-225ENST00000483506 ACP5P13686 325 aa17.76■□□□□ 0.43
HDAC6-225ENST00000483506 TPH1P17752 444 aa17.76■□□□□ 0.43
HDAC6-225ENST00000483506 FASLGP48023 281 aa17.76■□□□□ 0.43
HDAC6-225ENST00000483506 MAZP56270 477 aaKnown RBP17.76■□□□□ 0.43
HDAC6-225ENST00000483506 POU6F1Q14863 301 aa17.76■□□□□ 0.43
HDAC6-225ENST00000483506 TTC27Q6P3X3 843 aa17.76■□□□□ 0.43
HDAC6-225ENST00000483506 GSTA5Q7RTV2 222 aa17.76■□□□□ 0.43
HDAC6-225ENST00000483506 SFRP1Q8N474 314 aa17.76■□□□□ 0.43
HDAC6-225ENST00000483506 STYXQ8WUJ0 223 aa17.76■□□□□ 0.43
HDAC6-225ENST00000483506 ULK4Q96C45 1275 aa17.76■□□□□ 0.43
HDAC6-225ENST00000483506 GRAMD1AQ96CP6 724 aa17.76■□□□□ 0.43
HDAC6-225ENST00000483506 DNAJC1Q96KC8 554 aaKnown RBP17.76■□□□□ 0.43
HDAC6-225ENST00000483506 DEPDC7Q96QD5 511 aa17.76■□□□□ 0.43
HDAC6-225ENST00000483506 RANBP9Q96S59 729 aa17.76■□□□□ 0.43
HDAC6-225ENST00000483506 LRIT1Q9P2V4 623 aa17.76■□□□□ 0.43
HDAC6-225ENST00000483506 DKK4Q9UBT3 224 aa17.76■□□□□ 0.43
HDAC6-225ENST00000483506 TBC1D29Q9UFV1 150 aa17.76■□□□□ 0.43
HDAC6-225ENST00000483506 TRBV5-4A0A0C4DH59 114 aa17.75■□□□□ 0.43
HDAC6-225ENST00000483506 KCNJ13O60928 360 aa17.75■□□□□ 0.43
HDAC6-225ENST00000483506 APRTP07741 180 aa17.75■□□□□ 0.43
HDAC6-225ENST00000483506 ZNF7P17097 686 aaPredicted RBP17.75■□□□□ 0.43
HDAC6-225ENST00000483506 TCP1P17987 556 aaKnown RBP17.75■□□□□ 0.43
HDAC6-225ENST00000483506 GRIA1P42261 906 aa17.75■□□□□ 0.43
HDAC6-225ENST00000483506 LMAN1P49257 510 aa17.75■□□□□ 0.43
HDAC6-225ENST00000483506 LAMB3Q13751 1172 aa17.75■□□□□ 0.43
HDAC6-225ENST00000483506 GTF2H3Q13889 308 aa17.75■□□□□ 0.43
HDAC6-225ENST00000483506 GPR33Q49SQ1 333 aa17.75■□□□□ 0.43
HDAC6-225ENST00000483506 PAPD7Q5XG87 772 aaKnown RBP17.75■□□□□ 0.43
HDAC6-225ENST00000483506 CRTC3Q6UUV7 619 aa17.75■□□□□ 0.43
HDAC6-225ENST00000483506 RBM44Q6ZP01 1051 aaKnown RBP17.75■□□□□ 0.43
HDAC6-225ENST00000483506 SNX20Q7Z614 316 aa17.75■□□□□ 0.43
HDAC6-225ENST00000483506 SPRED1Q7Z699 444 aa17.75■□□□□ 0.43
HDAC6-225ENST00000483506 RASGEF1AQ8N9B8 481 aa17.75■□□□□ 0.43
HDAC6-225ENST00000483506 GDAP1Q8TB36 358 aa17.75■□□□□ 0.43
HDAC6-225ENST00000483506 PATE1Q8WXA2 126 aa17.75■□□□□ 0.43
HDAC6-225ENST00000483506 MAGOHBQ96A72 148 aaKnown RBP17.75■□□□□ 0.43
HDAC6-225ENST00000483506 NRSN2Q9GZP1 204 aa17.75■□□□□ 0.43
HDAC6-225ENST00000483506 ASB8Q9H765 288 aa17.75■□□□□ 0.43
HDAC6-225ENST00000483506 PIH1D1Q9NWS0 290 aaKnown RBP17.75■□□□□ 0.43
HDAC6-225ENST00000483506 SLC23A2Q9UGH3 650 aa17.75■□□□□ 0.43
HDAC6-225ENST00000483506 KCNK6Q9Y257 313 aa17.75■□□□□ 0.43
HDAC6-225ENST00000483506 NEU2Q9Y3R4 380 aa17.75■□□□□ 0.43
HDAC6-225ENST00000483506 A0A1W2PQM1 296 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 HEATR9A2RTY3 570 aa17.74■□□□□ 0.43
HDAC6-225ENST00000483506 TRABD2BA6NFA1 517 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms