RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 CATSPERZQ9NTU4 200 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 SMOXQ9NWM0 555 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 MARCH4Q9P2E8 410 aaPredicted RBP17.66■□□□□ 0.42
CPNE1-224ENST00000483359 ATXN10Q9UBB4 475 aa17.66■□□□□ 0.42
CPNE1-224ENST00000483359 MTRF1LQ9UGC7 380 aaKnown RBP17.66■□□□□ 0.42
CPNE1-224ENST00000483359 PCYT1BQ9Y5K3 369 aaPredicted RBP17.66■□□□□ 0.42
CPNE1-224ENST00000483359 LRP4O75096 1905 aa17.65■□□□□ 0.42
CPNE1-224ENST00000483359 LRP3O75074 770 aa17.65■□□□□ 0.42
CPNE1-224ENST00000483359 FUCA1P04066 466 aa17.65■□□□□ 0.42
CPNE1-224ENST00000483359 HOXC4P09017 264 aaPredicted RBP17.65■□□□□ 0.42
CPNE1-224ENST00000483359 SRP54P61011 504 aaKnown RBP17.65■□□□□ 0.42
CPNE1-224ENST00000483359 PPARDQ03181 441 aa17.65■□□□□ 0.42
CPNE1-224ENST00000483359 DET1Q7L5Y6 550 aa17.65■□□□□ 0.42
CPNE1-224ENST00000483359 DDHD1Q8NEL9 900 aa17.65■□□□□ 0.42
CPNE1-224ENST00000483359 C9orf72Q96LT7 481 aa17.65■□□□□ 0.42
CPNE1-224ENST00000483359 TTC25Q96NG3 672 aa17.65■□□□□ 0.42
CPNE1-224ENST00000483359 BOCQ9BWV1 1114 aa17.65■□□□□ 0.42
CPNE1-224ENST00000483359 ANKZF1Q9H8Y5 726 aa17.65■□□□□ 0.42
CPNE1-224ENST00000483359 CARS2Q9HA77 564 aaKnown RBP17.65■□□□□ 0.42
CPNE1-224ENST00000483359 PLAC1Q9HBJ0 212 aa17.65■□□□□ 0.42
CPNE1-224ENST00000483359 C20orf96Q9NUD7 363 aaPredicted RBP17.65■□□□□ 0.42
CPNE1-224ENST00000483359 APOBEC3BQ9UH17 382 aaKnown RBP17.65■□□□□ 0.42
CPNE1-224ENST00000483359 SUFUQ9UMX1 484 aa17.65■□□□□ 0.42
CPNE1-224ENST00000483359 GDF9O60383 454 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 CER1O95813 267 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 ZNF8P17098 575 aaPredicted RBP17.64■□□□□ 0.41
CPNE1-224ENST00000483359 JUNDP17535 347 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 ACRV1P26436 265 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 GNPDA1P46926 289 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 ARCN1P48444 511 aaKnown RBP17.64■□□□□ 0.41
CPNE1-224ENST00000483359 CUL1Q13616 776 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 GPR33Q49SQ1 333 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 LDLRAP1Q5SW96 308 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 CRTC3Q6UUV7 619 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 IL27RAQ6UWB1 636 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 ADGRG6Q86SQ4 1221 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 PHACTR4Q8IZ21 702 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 PYROXD1Q8WU10 500 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 ULK4Q96C45 1275 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 NAT9Q9BTE0 207 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 ZDHHC5Q9C0B5 715 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 PPANQ9NQ55 473 aaKnown RBP17.64■□□□□ 0.41
CPNE1-224ENST00000483359 SLC17A4Q9Y2C5 497 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 AGAP14A8MT82 685 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 CD3EAPO15446 510 aaKnown RBP17.64■□□□□ 0.41
CPNE1-224ENST00000483359 RASGRP1O95267 797 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 NME1P15531 152 aaKnown RBP17.64■□□□□ 0.41
CPNE1-224ENST00000483359 MSH3P20585 1137 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 ARRB1P49407 418 aaPredicted RBP17.64■□□□□ 0.41
CPNE1-224ENST00000483359 HK3P52790 923 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 TMEM115Q12893 351 aaPredicted RBP17.64■□□□□ 0.41
CPNE1-224ENST00000483359 DBN1Q16643 649 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 LONRF1Q17RB8 773 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 PLA2G4EQ3MJ16 856 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 ARMC3Q5W041 872 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.64■□□□□ 0.412e-6■■■■■ 26.8
CPNE1-224ENST00000483359 COPS8Q99627 209 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 TRIM39Q9HCM9 518 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 FAM169AQ9Y6X4 670 aa17.64■□□□□ 0.41
CPNE1-224ENST00000483359 TDRD6O60522 2096 aaKnown RBP17.64■□□□□ 0.41
CPNE1-224ENST00000483359 TRBV5-4A0A0C4DH59 114 aa17.63■□□□□ 0.41
CPNE1-224ENST00000483359 OR2AG2A6NM03 316 aa17.63■□□□□ 0.41
CPNE1-224ENST00000483359 EIF3HO15372 352 aaKnown RBP eCLIP17.63■□□□□ 0.418e-7■■□□□ 13.6
CPNE1-224ENST00000483359 CDK14O94921 469 aa17.63■□□□□ 0.41
CPNE1-224ENST00000483359 TTC4O95801 387 aa17.63■□□□□ 0.41
CPNE1-224ENST00000483359 CSF2P04141 144 aa17.63■□□□□ 0.41
CPNE1-224ENST00000483359 ERVK-10P10266 1014 aa17.63■□□□□ 0.41
CPNE1-224ENST00000483359 ZNF423Q2M1K9 1284 aa17.63■□□□□ 0.41
CPNE1-224ENST00000483359 SPANXN3Q5MJ09 141 aa17.63■□□□□ 0.41
CPNE1-224ENST00000483359 KCNMB4Q86W47 210 aa17.63■□□□□ 0.41
CPNE1-224ENST00000483359 CCNJLQ8IV13 435 aa17.63■□□□□ 0.41
CPNE1-224ENST00000483359 UBXN4Q92575 508 aa17.63■□□□□ 0.41
CPNE1-224ENST00000483359 SLC13A1Q9BZW2 595 aa17.63■□□□□ 0.41
CPNE1-224ENST00000483359 ERVMER34-1Q9H9K5 563 aa17.63■□□□□ 0.41
CPNE1-224ENST00000483359 TM7SF3Q9NS93 570 aa17.63■□□□□ 0.41
CPNE1-224ENST00000483359 VPS18Q9P253 973 aa17.63■□□□□ 0.41
CPNE1-224ENST00000483359 ZNHIT2Q9UHR6 403 aa17.63■□□□□ 0.41
CPNE1-224ENST00000483359 GPSM3Q9Y4H4 160 aa17.63■□□□□ 0.41
CPNE1-224ENST00000483359 RIF1Q5UIP0 2472 aaKnown RBP17.63■□□□□ 0.41
CPNE1-224ENST00000483359 DNAJC6O75061 913 aa17.62■□□□□ 0.41
CPNE1-224ENST00000483359 CELA2BP08218 269 aaPredicted RBP17.62■□□□□ 0.41
CPNE1-224ENST00000483359 SSTR1P30872 391 aa17.62■□□□□ 0.41
CPNE1-224ENST00000483359 MAGEA4P43358 317 aa17.62■□□□□ 0.41
CPNE1-224ENST00000483359 B4GALNT1Q00973 533 aa17.62■□□□□ 0.41
CPNE1-224ENST00000483359 BNIP3Q12983 259 aa17.62■□□□□ 0.41
CPNE1-224ENST00000483359 C1orf61Q13536 156 aa17.62■□□□□ 0.41
CPNE1-224ENST00000483359 THOC5Q13769 683 aaKnown RBP17.62■□□□□ 0.41
CPNE1-224ENST00000483359 GTF2H3Q13889 308 aa17.62■□□□□ 0.41
CPNE1-224ENST00000483359 SHBQ15464 509 aa17.62■□□□□ 0.41
CPNE1-224ENST00000483359 ERCC6LQ2NKX8 1250 aa17.62■□□□□ 0.41
CPNE1-224ENST00000483359 HSP90AA5PQ58FG0 334 aa17.62■□□□□ 0.41
CPNE1-224ENST00000483359 PRRT3Q5FWE3 981 aa17.62■□□□□ 0.41
CPNE1-224ENST00000483359 ZNF470Q6ECI4 717 aa17.62■□□□□ 0.41
CPNE1-224ENST00000483359 TRMT10BQ6PF06 316 aaKnown RBP17.62■□□□□ 0.41
CPNE1-224ENST00000483359 GATAD2AQ86YP4 633 aa17.62■□□□□ 0.41
CPNE1-224ENST00000483359 TRAPPC5Q8IUR0 188 aa17.62■□□□□ 0.41
CPNE1-224ENST00000483359 PALM2Q8IXS6 379 aa17.62■□□□□ 0.41
CPNE1-224ENST00000483359 KIAA2013Q8IYS2 634 aa17.62■□□□□ 0.41
CPNE1-224ENST00000483359 RASGEF1AQ8N9B8 481 aa17.62■□□□□ 0.41
CPNE1-224ENST00000483359 CERS2Q96G23 380 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms