RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 C1orf232A0A0U1RR37 186 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 SLC25A14O95258 325 aaPredicted RBP12.63□□□□□ -0.39
TMEM54-206ENST00000482771 FGF5P12034 268 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 GZMAP12544 262 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 IL4RP24394 825 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 SERPINB6P35237 376 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 GARSP41250 739 aaKnown RBP12.63□□□□□ -0.39
TMEM54-206ENST00000482771 CCL11P51671 97 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 CLCNKAP51800 687 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 SEMA5AQ13591 1074 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 NADK2Q4G0N4 442 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 ANKRD20A8PQ5CZ79 823 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 CCDC122Q5T0U0 273 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 HENMT1Q5T8I9 393 aaKnown RBP12.63□□□□□ -0.39
TMEM54-206ENST00000482771 CLEC17AQ6ZS10 378 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 ZNF571Q7Z3V5 609 aaPredicted RBP12.63□□□□□ -0.39
TMEM54-206ENST00000482771 LPCAT1Q8NF37 534 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 ARRDC2Q8TBH0 407 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 CCHCR1Q8TD31 782 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 CT55Q8WUE5 264 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 ZNF653Q96CK0 615 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 ZNF768Q9H5H4 540 aaKnown RBP12.63□□□□□ -0.39
TMEM54-206ENST00000482771 HAUS4Q9H6D7 363 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 AKIRIN1Q9H9L7 192 aaPredicted RBP12.63□□□□□ -0.39
TMEM54-206ENST00000482771 PCDH9Q9HC56 1237 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 PCDH18Q9HCL0 1135 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 TRIM39Q9HCM9 518 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 LHX9Q9NQ69 397 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 PKD2L2Q9NZM6 624 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 PCDHGA6Q9Y5G7 932 aa12.63□□□□□ -0.39
TMEM54-206ENST00000482771 SPENQ96T58 3664 aaKnown RBP12.62□□□□□ -0.39
TMEM54-206ENST00000482771 MED13Q9UHV7 2174 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 A1L4Q6 167 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 RGSL1A5PLK6 1076 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 MATN3O15232 486 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 MT-ND3P03897 115 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 ZNF165P49910 485 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 RPL26P61254 145 aaKnown RBP12.62□□□□□ -0.39
TMEM54-206ENST00000482771 NIPAL4Q0D2K0 466 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 MMRN1Q13201 1228 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 SEPT7Q16181 437 aaKnown RBP12.62□□□□□ -0.39
TMEM54-206ENST00000482771 QPCTQ16769 361 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.62□□□□□ -0.39
TMEM54-206ENST00000482771 TDRD12Q587J7 1177 aaKnown RBP12.62□□□□□ -0.39
TMEM54-206ENST00000482771 FAM199XQ6PEV8 388 aaPredicted RBP12.62□□□□□ -0.39
TMEM54-206ENST00000482771 FAM92BQ6ZTR7 304 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 PPP1R3BQ86XI6 285 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 LRRN4Q8WUT4 740 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 KLHL6Q8WZ60 621 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 ZDHHC12Q96GR4 267 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 LYSMD1Q96S90 227 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 SLC25A23Q9BV35 468 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 MLPHQ9BV36 600 aaPredicted RBP12.62□□□□□ -0.39
TMEM54-206ENST00000482771 SPATA16Q9BXB7 569 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 TDRD1Q9BXT4 1180 aaKnown RBP12.62□□□□□ -0.39
TMEM54-206ENST00000482771 ACTL8Q9H568 366 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 MRPL47Q9HD33 250 aaKnown RBP12.62□□□□□ -0.39
TMEM54-206ENST00000482771 DTLQ9NZJ0 730 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 RPL26L1Q9UNX3 145 aaKnown RBP12.62□□□□□ -0.39
TMEM54-206ENST00000482771 DNAJC16Q9Y2G8 782 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 MAP4K5Q9Y4K4 846 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 ADGRG1Q9Y653 693 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 SCINQ9Y6U3 715 aa12.62□□□□□ -0.39
TMEM54-206ENST00000482771 TEP1Q99973 2627 aaKnown RBP12.62□□□□□ -0.39
TMEM54-206ENST00000482771 HIVEP3Q5T1R4 2406 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 GOLGA6L3A6NEY3 463 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 PDZK1P1A8MUH7 402 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 ANKRD66B4E2M5 251 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 C21orf140B9A014 251 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 DDX3XO00571 662 aaKnown RBP eCLIP12.61□□□□□ -0.39
TMEM54-206ENST00000482771 TIAF1O95411 115 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 RNF224P0DH78 156 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 ZNF7P17097 686 aaPredicted RBP12.61□□□□□ -0.39
TMEM54-206ENST00000482771 NELFEP18615 380 aaKnown RBP12.61□□□□□ -0.39
TMEM54-206ENST00000482771 CA4P22748 312 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 RPL10P27635 214 aaKnown RBP12.61□□□□□ -0.39
TMEM54-206ENST00000482771 PGDP52209 483 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 KRT81Q14533 505 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 ASIC2Q16515 512 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 INSCQ1MX18 579 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 EIF2S3LQ2VIR3 472 aaKnown RBP12.61□□□□□ -0.39
TMEM54-206ENST00000482771 ALG1LQ6GMV1 187 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 PWWP2BQ6NUJ5 590 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 IRGCQ6NXR0 463 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 CRTC3Q6UUV7 619 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 APTXQ7Z2E3 356 aaKnown RBP12.61□□□□□ -0.39
TMEM54-206ENST00000482771 ADGRG6Q86SQ4 1221 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 MAML1Q92585 1016 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 RSC1A1Q92681 617 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 EID2BQ96D98 161 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 RUFY1Q96T51 708 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 GPR87Q9BY21 358 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 PDE7BQ9NP56 450 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 SLC40A1Q9NP59 571 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 CASS4Q9NQ75 786 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 RCOR3Q9P2K3 495 aaPredicted RBP12.61□□□□□ -0.39
TMEM54-206ENST00000482771 TRIM10Q9UDY6 481 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 MYO6Q9UM54 1294 aa12.61□□□□□ -0.39
TMEM54-206ENST00000482771 LRRC53A6NM62 1247 aa12.6□□□□□ -0.39
TMEM54-206ENST00000482771 ENO4A6NNW6 628 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms