RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 UTS2RQ9UKP6 389 aa5.29□□□□□ -1.56
COPA-203ENST00000481040 COG5Q9UP83 839 aa5.29□□□□□ -1.56
COPA-203ENST00000481040 ATP6V0A2Q9Y487 856 aa5.29□□□□□ -1.56
COPA-203ENST00000481040 STON1Q9Y6Q2 735 aa5.29□□□□□ -1.56
COPA-203ENST00000481040 SMIM30A4D0T7 59 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 TMEM8BA6NDV4 472 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 TRIM77I1YAP6 450 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 BCAS2O75934 225 aaPredicted RBP5.28□□□□□ -1.56
COPA-203ENST00000481040 TOMM70O94826 608 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 ZNF202O95125 648 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 MMP3P08254 477 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 CBSLP0DN79 551 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 CBSP35520 551 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 KHKP50053 298 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 SNU13P55769 128 aaKnown RBP5.28□□□□□ -1.56
COPA-203ENST00000481040 POLR2FP61218 127 aaKnown RBP5.28□□□□□ -1.56
COPA-203ENST00000481040 HSPB3Q12988 150 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 TAZQ16635 292 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 HFEQ30201 348 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 KLHL26Q53HC5 615 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 TSTD2Q5T7W7 516 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 ANKRD54Q6NXT1 300 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 MTSS1LQ765P7 747 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 TRILQ7L0X0 811 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 DET1Q7L5Y6 550 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 CACNA2D4Q7Z3S7 1137 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 CCDC190Q86UF4 302 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 DZIP1Q86YF9 867 aaKnown RBP5.28□□□□□ -1.56
COPA-203ENST00000481040 SFRP1Q8N474 314 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 HORMAD2Q8N7B1 307 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 OR7G3Q8NG95 312 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 C9orf43Q8TAL5 461 aaPredicted RBP5.28□□□□□ -1.56
COPA-203ENST00000481040 HM13Q8TCT9 377 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 BCAS4Q8TDM0 211 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 DNASE1L2Q92874 299 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 NLRP4Q96MN2 994 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 MS4A10Q96PG2 267 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 PLEKHG4BQ96PX9 1271 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 PRAM1Q96QH2 718 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 OLFM1Q99784 485 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 TUFT1Q9NNX1 390 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 PNRC2Q9NPJ4 139 aaKnown RBP5.28□□□□□ -1.56
COPA-203ENST00000481040 IARS2Q9NSE4 1012 aaKnown RBP5.28□□□□□ -1.56
COPA-203ENST00000481040 RNF146Q9NTX7 359 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 ANO10Q9NW15 660 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 APPL1Q9UKG1 709 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 ITGA11Q9UKX5 1188 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 SNX7Q9UNH6 387 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 TESMINQ9Y4I5 508 aa5.28□□□□□ -1.56
COPA-203ENST00000481040 K7ESM1 405 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 TXNL1O43396 289 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 RNF8O76064 485 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 KCNK5O95279 499 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 CLDN7O95471 211 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 GUCA1CO95843 209 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 CYC1P08574 325 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 UROSP10746 265 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 INSRRP14616 1297 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 TYMPP19971 482 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 NMBRP28336 390 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 DCTDP32321 178 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 SOAT1P35610 550 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 AVPR1BP47901 424 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 METAP2P50579 478 aaKnown RBP eCLIP5.27□□□□□ -1.57
COPA-203ENST00000481040 ZNF75DP51815 510 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 ADARP55265 1226 aaKnown RBP5.27□□□□□ -1.57
COPA-203ENST00000481040 NME5P56597 212 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 KIAA1024LP59773 190 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 ST8SIA6P61647 398 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 GRIK2Q13002 908 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 PTPAQ15257 358 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 MYLK3Q32MK0 819 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 KBTBD12Q3ZCT8 623 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 CERKLQ49MI3 558 aaPredicted RBP5.27□□□□□ -1.57
COPA-203ENST00000481040 KCNT1Q5JUK3 1230 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 GALNT17Q6IS24 598 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 METTL2BQ6P1Q9 378 aaKnown RBP5.27□□□□□ -1.57
COPA-203ENST00000481040 FAM198BQ6UWH4 519 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 KCTD9Q7L273 389 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 TMEM173Q86WV6 379 aaPredicted RBP5.27□□□□□ -1.57
COPA-203ENST00000481040 SFTPA2Q8IWL1 248 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 DDIASQ8IXT1 998 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 SPATA6LQ8N4H0 392 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 AGBL3Q8NEM8 1001 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 DBF4BQ8NFT6 615 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 OR1J2Q8NGS2 313 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 PSMA8Q8TAA3 256 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 ZNF398Q8TD17 642 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 CAVIN3Q969G5 261 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 MIB2Q96AX9 1013 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 METTL2AQ96IZ6 378 aaKnown RBP5.27□□□□□ -1.57
COPA-203ENST00000481040 ZNF333Q96JL9 665 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 CRAMP1Q96RY5 1269 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 SMC6Q96SB8 1091 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 PKP4Q99569 1192 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 HNRNPABQ99729 332 aaKnown RBP5.27□□□□□ -1.57
COPA-203ENST00000481040 TMEM79Q9BSE2 394 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 NPFFR1Q9GZQ6 430 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 ZNF350Q9GZX5 532 aa5.27□□□□□ -1.57
COPA-203ENST00000481040 ESRP2Q9H6T0 727 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms