RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 ARSDP51689 593 aa26.5■■□□□ 1.83
CCM2-211ENST00000478582 CRADDP78560 199 aa26.5■■□□□ 1.83
CCM2-211ENST00000478582 GPR33Q49SQ1 333 aa26.5■■□□□ 1.83
CCM2-211ENST00000478582 PRRT3Q5FWE3 981 aa26.5■■□□□ 1.83
CCM2-211ENST00000478582 LDLRAP1Q5SW96 308 aa26.5■■□□□ 1.83
CCM2-211ENST00000478582 HIBCHQ6NVY1 386 aaPredicted RBP26.5■■□□□ 1.83
CCM2-211ENST00000478582 DOK6Q6PKX4 331 aa26.5■■□□□ 1.83
CCM2-211ENST00000478582 SNX20Q7Z614 316 aa26.5■■□□□ 1.83
CCM2-211ENST00000478582 ADGRG6Q86SQ4 1221 aa26.5■■□□□ 1.83
CCM2-211ENST00000478582 SGSM3Q96HU1 749 aa26.5■■□□□ 1.83
CCM2-211ENST00000478582 CARS2Q9HA77 564 aaKnown RBP26.5■■□□□ 1.83
CCM2-211ENST00000478582 TRNAU1APQ9NX07 287 aaKnown RBP26.5■■□□□ 1.83
CCM2-211ENST00000478582 ATXN10Q9UBB4 475 aa26.5■■□□□ 1.83
CCM2-211ENST00000478582 MOSPD1Q9UJG1 213 aa26.5■■□□□ 1.83
CCM2-211ENST00000478582 SOX13Q9UN79 622 aa26.5■■□□□ 1.83
CCM2-211ENST00000478582 SLC30A1Q9Y6M5 507 aa26.5■■□□□ 1.83
CCM2-211ENST00000478582 MAGEB16A2A368 324 aa26.49■■□□□ 1.83
CCM2-211ENST00000478582 GPR39O43194 453 aa26.49■■□□□ 1.83
CCM2-211ENST00000478582 NUAK1O60285 661 aa26.49■■□□□ 1.83
CCM2-211ENST00000478582 GIMD1P0DJR0 217 aa26.49■■□□□ 1.83
CCM2-211ENST00000478582 CTSEP14091 401 aa26.49■■□□□ 1.83
CCM2-211ENST00000478582 ITGALP20701 1170 aa26.49■■□□□ 1.83
CCM2-211ENST00000478582 ELOCQ15369 112 aa26.49■■□□□ 1.83
CCM2-211ENST00000478582 PYCR3Q53H96 274 aa26.49■■□□□ 1.83
CCM2-211ENST00000478582 EID2Q8N6I1 236 aa26.49■■□□□ 1.83
CCM2-211ENST00000478582 BBOF1Q8ND07 529 aa26.49■■□□□ 1.83
CCM2-211ENST00000478582 LMX1AQ8TE12 382 aa26.49■■□□□ 1.83
CCM2-211ENST00000478582 ULK4Q96C45 1275 aa26.49■■□□□ 1.83
CCM2-211ENST00000478582 CLPBQ9H078 707 aa26.49■■□□□ 1.83
CCM2-211ENST00000478582 SUDS3Q9H7L9 328 aaPredicted RBP26.49■■□□□ 1.83
CCM2-211ENST00000478582 TREX1Q9NSU2 369 aa26.49■■□□□ 1.83
CCM2-211ENST00000478582 SLC2A6Q9UGQ3 507 aa26.49■■□□□ 1.83
CCM2-211ENST00000478582 TRBV5-4A0A0C4DH59 114 aa26.48■■□□□ 1.83
CCM2-211ENST00000478582 CCDC78A2IDD5 438 aa26.48■■□□□ 1.83
CCM2-211ENST00000478582 TPP1O14773 563 aa26.48■■□□□ 1.83
CCM2-211ENST00000478582 TP73O15350 636 aa26.48■■□□□ 1.83
CCM2-211ENST00000478582 ZNF500O60304 480 aaPredicted RBP26.48■■□□□ 1.83
CCM2-211ENST00000478582 LDOC1O95751 146 aaPredicted RBP26.48■■□□□ 1.83
CCM2-211ENST00000478582 RPL21P46778 160 aaKnown RBP26.48■■□□□ 1.83
CCM2-211ENST00000478582 MRPS25P82663 173 aaKnown RBP26.48■■□□□ 1.83
CCM2-211ENST00000478582 GPRC6AQ5T6X5 926 aa26.48■■□□□ 1.83
CCM2-211ENST00000478582 DUPD1Q68J44 220 aa26.48■■□□□ 1.83
CCM2-211ENST00000478582 MMGT1Q8N4V1 131 aa26.48■■□□□ 1.83
CCM2-211ENST00000478582 HDAC10Q969S8 669 aa26.48■■□□□ 1.83
CCM2-211ENST00000478582 SIGLEC10Q96LC7 697 aa26.48■■□□□ 1.83
CCM2-211ENST00000478582 TRIM31Q9BZY9 425 aa26.48■■□□□ 1.83
CCM2-211ENST00000478582 TMEM168Q9H0V1 697 aa26.48■■□□□ 1.83
CCM2-211ENST00000478582 SNX24Q9Y343 169 aa26.48■■□□□ 1.83
CCM2-211ENST00000478582 CHD8Q9HCK8 2581 aa26.47■■□□□ 1.83
CCM2-211ENST00000478582 CCDC162PA2VCL2 907 aa26.47■■□□□ 1.83
CCM2-211ENST00000478582 LMO7DNF2Z398 122 aa26.47■■□□□ 1.83
CCM2-211ENST00000478582 CHUKO15111 745 aa26.47■■□□□ 1.83
CCM2-211ENST00000478582 ZNF8P17098 575 aaPredicted RBP26.47■■□□□ 1.83
CCM2-211ENST00000478582 GNPDA1P46926 289 aa26.47■■□□□ 1.83
CCM2-211ENST00000478582 ITGA8P53708 1063 aa26.47■■□□□ 1.83
CCM2-211ENST00000478582 CACNG1Q06432 222 aa26.47■■□□□ 1.83
CCM2-211ENST00000478582 TMEM115Q12893 351 aaPredicted RBP26.47■■□□□ 1.83
CCM2-211ENST00000478582 C1orf61Q13536 156 aa26.47■■□□□ 1.83
CCM2-211ENST00000478582 KHDC1Q4VXA5 237 aaKnown RBP26.47■■□□□ 1.83
CCM2-211ENST00000478582 ZNF648Q5T619 568 aaPredicted RBP26.47■■□□□ 1.83
CCM2-211ENST00000478582 LVRNQ6Q4G3 990 aa26.47■■□□□ 1.83
CCM2-211ENST00000478582 UNQ6494/PRO21346Q6UXR6 183 aa26.47■■□□□ 1.83
CCM2-211ENST00000478582 MPP5Q8N3R9 675 aa26.47■■□□□ 1.83
CCM2-211ENST00000478582 OR4C6Q8NH72 309 aa26.47■■□□□ 1.83
CCM2-211ENST00000478582 GDAP1Q8TB36 358 aa26.47■■□□□ 1.83
CCM2-211ENST00000478582 GPBAR1Q8TDU6 330 aa26.47■■□□□ 1.83
CCM2-211ENST00000478582 CNDP2Q96KP4 475 aaKnown RBP26.47■■□□□ 1.83
CCM2-211ENST00000478582 TMEM121BQ9BXQ6 578 aaPredicted RBP26.47■■□□□ 1.83
CCM2-211ENST00000478582 OR2AG1Q9H205 316 aa26.47■■□□□ 1.83
CCM2-211ENST00000478582 ARFGAP3Q9NP61 516 aa26.47■■□□□ 1.83
CCM2-211ENST00000478582 NLGN3Q9NZ94 848 aa26.47■■□□□ 1.83
CCM2-211ENST00000478582 WHRNQ9P202 907 aa26.47■■□□□ 1.83
CCM2-211ENST00000478582 ARID1BQ8NFD5 2236 aaPredicted RBP26.46■■□□□ 1.83
CCM2-211ENST00000478582 CTAGE15A4D2H0 777 aa26.46■■□□□ 1.83
CCM2-211ENST00000478582 C1QTNF9BB2RNN3 333 aa26.46■■□□□ 1.83
CCM2-211ENST00000478582 CDK14O94921 469 aa26.46■■□□□ 1.83
CCM2-211ENST00000478582 C1QTNF9P0C862 333 aa26.46■■□□□ 1.83
CCM2-211ENST00000478582 CTAGE8P0CG41 777 aa26.46■■□□□ 1.83
CCM2-211ENST00000478582 NMBRP28336 390 aa26.46■■□□□ 1.83
CCM2-211ENST00000478582 ZRANB3Q5FWF4 1079 aa26.46■■□□□ 1.83
CCM2-211ENST00000478582 MARK2Q7KZI7 788 aaKnown RBP26.46■■□□□ 1.83
CCM2-211ENST00000478582 CTAGE6Q86UF2 777 aa26.46■■□□□ 1.83
CCM2-211ENST00000478582 GALNT13Q8IUC8 556 aa26.46■■□□□ 1.83
CCM2-211ENST00000478582 CTAGE4Q8IX94 777 aa26.46■■□□□ 1.83
CCM2-211ENST00000478582 NXPE1Q8N323 547 aa26.46■■□□□ 1.83
CCM2-211ENST00000478582 CEP112Q8N8E3 955 aa26.46■■□□□ 1.83
CCM2-211ENST00000478582 GATA6Q92908 595 aa26.46■■□□□ 1.83
CCM2-211ENST00000478582 OR2M4Q96R27 311 aa26.46■■□□□ 1.83
CCM2-211ENST00000478582 DUSP23Q9BVJ7 150 aa26.46■■□□□ 1.83
CCM2-211ENST00000478582 ZCCHC2Q9C0B9 1178 aaKnown RBP26.46■■□□□ 1.83
CCM2-211ENST00000478582 RAB17Q9H0T7 212 aa26.46■■□□□ 1.83
CCM2-211ENST00000478582 CRLS1Q9UJA2 301 aa26.46■■□□□ 1.83
CCM2-211ENST00000478582 ANAPC5Q9UJX4 755 aa26.46■■□□□ 1.83
CCM2-211ENST00000478582 UTP11Q9Y3A2 253 aaKnown RBP26.46■■□□□ 1.83
CCM2-211ENST00000478582 TDRD6O60522 2096 aaKnown RBP26.46■■□□□ 1.83
CCM2-211ENST00000478582 FAM237BA0A1B0GVD1 139 aa26.45■■□□□ 1.82
CCM2-211ENST00000478582 MTX2O75431 263 aa26.45■■□□□ 1.82
CCM2-211ENST00000478582 PROS1P07225 676 aa26.45■■□□□ 1.82
CCM2-211ENST00000478582 ALPPL2P10696 532 aa26.45■■□□□ 1.82
CCM2-211ENST00000478582 FOXN2P32314 431 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms