RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 UMODL1-AS1Q8N2C9 162 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 SIDT2Q8NBJ9 832 aaKnown RBP7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 ACBD4Q8NC06 268 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 SPATA3Q8NHX4 192 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 C18orf8Q96DM3 657 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 ZDHHC12Q96GR4 267 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 ZNF514Q96K75 400 aaPredicted RBP7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 AGAP2Q99490 1192 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 SPOCK3Q9BQ16 436 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 WDR77Q9BQA1 342 aaPredicted RBP7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 ABCG8Q9H221 673 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 ALG2Q9H553 416 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 FGF21Q9NSA1 209 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 GOLGA6AQ9NYA3 693 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 VPS18Q9P253 973 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 ZNF624Q9P2J8 865 aaPredicted RBP7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 RCOR1Q9UKL0 485 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 ACANP16112 2415 aa7.2□□□□□ -1.26
SPTLC1-205ENST00000477888 TRIM49BA6NDI0 452 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 NPIPB15A6NHN6 443 aaPredicted RBP7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 PCDH17O14917 1159 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 SCRG1O75711 98 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 PALMO75781 387 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 KLF7O75840 302 aaPredicted RBP7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 ATP1A1P05023 1023 aaKnown RBP7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 EBLN1P0CF75 366 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 ACP5P13686 325 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 AGAP20933 346 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 EPHB2P29323 1055 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 CDH5P33151 784 aaPredicted RBP7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 RORAP35398 523 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 USP8P40818 1118 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 CLCNKAP51800 687 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 TDGF1P3P51864 188 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 MARSP56192 900 aaKnown RBP7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 GSDMDP57764 484 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 KCNK10P57789 538 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 PPP1CAP62136 330 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 TUBB4BP68371 445 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 LRRC63Q05C16 580 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 PAK1Q13153 545 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 TUBB2AQ13885 445 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 CDSNQ15517 529 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 ASIC2Q16515 512 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 HIF1AQ16665 826 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 C8orf34Q49A92 452 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 COBLL1Q53SF7 1204 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 C2CD6Q53TS8 623 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 PRAMEF17Q5VTA0 474 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 FCRL6Q6DN72 434 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 GJB7Q6PEY0 223 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 FAM198BQ6UWH4 519 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 IGFL2Q6UWQ7 119 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 ZNF765Q7L2R6 523 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 MRGPREQ86SM8 312 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 TSPAN33Q86UF1 283 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 D2HGDHQ8N465 521 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 AOPEPQ8N6M6 819 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 CCDC185Q8N715 623 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 PPP4R1Q8TF05 950 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 UBXN4Q92575 508 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 SCAMP4Q969E2 229 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 AP2M1Q96CW1 435 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 SCRN2Q96FV2 425 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 FER1L6-AS2Q96M78 137 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 TSG101Q99816 390 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 MLPHQ9BV36 600 aaPredicted RBP7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 TUBB2BQ9BVA1 445 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 SCAND2PQ9GZW5 306 aaPredicted RBP7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 CXXC4Q9H2H0 198 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 LRRC19Q9H756 370 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 SLC40A1Q9NP59 571 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 PLCB1Q9NQ66 1216 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 DLL4Q9NR61 685 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 KCND1Q9NSA2 647 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 SUCOQ9UBS9 1254 aaKnown RBP7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 CD84Q9UIB8 345 aa7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 CNOT6Q9ULM6 557 aaKnown RBP7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 RPH3AQ9Y2J0 694 aaPredicted RBP7.19□□□□□ -1.26
SPTLC1-205ENST00000477888 MAP1AP78559 2803 aaPredicted RBP7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 FAM237AA0A1B0GTK4 181 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 A0A1W2PQ67 120 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 MASP2O00187 686 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 CCL21O00585 134 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 ASMTLO95671 621 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 VIPP01282 170 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 KLK2P20151 261 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 KRT9P35527 623 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 SOX11P35716 441 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 PBX1P40424 430 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 SCNN1BP51168 640 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 PTSQ03393 145 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 CDC16Q13042 620 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 SSPNQ14714 243 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 C15orf59Q2T9L4 293 aaPredicted RBP7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 FOXD4L6Q3SYB3 417 aaPredicted RBP7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 CCDC14Q49A88 953 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 B3GNTL1Q67FW5 361 aaPredicted RBP7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 IRGCQ6NXR0 463 aa7.18□□□□□ -1.26
SPTLC1-205ENST00000477888 MTFR2Q6P444 385 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms